Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.28□□□□□ -1.88
TRBV11-1A0A0K0K1C0 ZNF734P-201ENST00000419494 1534 ntBASIC3.28□□□□□ -1.88
TRBV11-1A0A0K0K1C0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
TRBV11-1A0A0K0K1C0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.89
TRBV11-1A0A0K0K1C0 CEP170P1-201ENST00000502249 4587 ntBASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RNU1-18P-201ENST00000363062 164 ntBASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RNU6-650P-201ENST00000365658 111 ntBASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RNU6-629P-201ENST00000384061 103 ntBASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 SFR1P1-201ENST00000403720 688 ntBASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 U3.39-201ENST00000408569 239 ntBASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC114973.1-201ENST00000429057 632 ntBASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 MTCO3P20-201ENST00000454926 688 ntBASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 HMGN2P16-201ENST00000456802 261 ntBASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC025518.1-201ENST00000479856 347 ntBASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 MTCO2P32-201ENST00000514865 403 ntBASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RNU6-362P-201ENST00000516736 90 ntBASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 SNORA76.2-201ENST00000517095 137 ntBASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC010735.1-201ENST00000567305 1026 ntBASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC099489.2-201ENST00000574976 260 ntBASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RN7SL339P-201ENST00000580597 296 ntBASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 MIR3944-201ENST00000581277 108 ntBASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC006254.3-201ENST00000603353 884 ntBASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC069200.1-201ENST00000609511 323 ntBASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC004777.1-201ENST00000624317 287 ntBASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
TRBV11-1A0A0K0K1C0 MTND4P21-201ENST00000453886 1357 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 MTCO1P6-201ENST00000481192 1384 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 SNORA63.1-201ENST00000362493 131 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RNU6-77P-201ENST00000410554 91 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RN7SKP53-201ENST00000411337 315 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RPL30P2-201ENST00000414021 291 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 HSFY1P1-201ENST00000423928 1178 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC006989.1-201ENST00000427212 131 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC096632.1-201ENST00000427395 310 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 ATP5JP1-201ENST00000431631 322 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RPL7P52-201ENST00000449200 742 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RN7SL93P-201ENST00000463035 293 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC023598.1-201ENST00000472521 361 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 HMGB3P14-201ENST00000494195 599 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC007458.1-201ENST00000542812 373 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC004217.3-201ENST00000551552 878 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AL389895.1-201ENST00000554127 252 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AL731537.2-201ENST00000561565 951 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 LINC00557-201ENST00000563184 1279 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC245100.7-201ENST00000609678 442 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AL590282.1-201ENST00000610379 1136 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC008121.2-201ENST00000614647 523 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC092184.1-201ENST00000625042 715 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC244205.2-202ENST00000635781 342 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 U6.105-201ENST00000637379 88 ntBASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms