Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC010928.3-201ENST00000587712 541 ntBASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 AC124312.4-201ENST00000605533 310 ntBASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 Z99129.2-201ENST00000619967 314 ntBASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 AC010338.1-201ENST00000621823 717 ntBASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 AC084035.1-201ENST00000634543 607 ntBASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 OR8B1P-202ENST00000641132 1178 ntBASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 MAPK10-362ENST00000641864 4484 ntBASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 RNA5SP374-201ENST00000362939 125 ntBASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 RPL23AP47-201ENST00000408017 460 ntBASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 VDAC1P3-201ENST00000434069 851 ntBASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 ARPC3P2-201ENST00000457786 533 ntBASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 AC012181.1-201ENST00000479895 423 ntBASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 PSMA2P1-201ENST00000526365 646 ntBASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 AC005951.1-201ENST00000576706 485 ntBASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 AC016877.3-201ENST00000606778 504 ntBASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 AC016252.1-201ENST00000609721 474 ntBASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 AC090115.4-201ENST00000609970 188 ntBASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 AL355493.4-201ENST00000618530 292 ntBASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 MIR6075-201ENST00000620782 95 ntBASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 AC244100.1-202ENST00000621554 382 ntBASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 AC116563.2-201ENST00000624751 535 ntBASIC2.59□□□□□ -1.99
TRAV27A0A087WT01 ASNSP3-201ENST00000451989 1306 ntBASIC2.59□□□□□ -2
TRAV27A0A087WT01 AC096656.1-201ENST00000623826 1364 ntBASIC2.59□□□□□ -2
TRAV27A0A087WT01 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.59□□□□□ -2
TRAV27A0A087WT01 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.59□□□□□ -2
TRAV27A0A087WT01 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.58□□□□□ -2
TRAV27A0A087WT01 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.58□□□□□ -2
TRAV27A0A087WT01 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRAV27A0A087WT01 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.58□□□□□ -2
TRAV27A0A087WT01 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
TRAV27A0A087WT01 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.58□□□□□ -2
TRAV27A0A087WT01 GABRG2-229ENST00000641017 3628 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 ZNF33CP-201ENST00000432492 2030 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TRAV27A0A087WT01 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.58□□□□□ -2
TRAV27A0A087WT01 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.58□□□□□ -2
TRAV27A0A087WT01 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.58□□□□□ -2
TRAV27A0A087WT01 AC013404.1-201ENST00000413068 249 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 RPL31P2-201ENST00000413849 377 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 AC022018.1-201ENST00000430685 241 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 AL590103.1-201ENST00000434488 307 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 AC093156.1-201ENST00000440382 670 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 AC044797.1-201ENST00000445744 679 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRAV27A0A087WT01 GAPDHP27-201ENST00000447427 1020 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 AC104308.1-201ENST00000454621 333 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.58□□□□□ -2
TRAV27A0A087WT01 AC089999.1-201ENST00000460336 374 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 RPL7P49-201ENST00000471402 708 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRAV27A0A087WT01 RPS27AP1-201ENST00000475545 471 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.58□□□□□ -2
TRAV27A0A087WT01 MTND4LP22-201ENST00000508209 276 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.58□□□□□ -2
TRAV27A0A087WT01 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.58□□□□□ -2
TRAV27A0A087WT01 AP001207.1-201ENST00000524051 481 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.58□□□□□ -2
TRAV27A0A087WT01 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.58□□□□□ -2
TRAV27A0A087WT01 SYF2P1-201ENST00000550658 413 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 AL163153.1-201ENST00000554223 283 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 OR4H12P-201ENST00000556269 907 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 MIR4506-201ENST00000584693 77 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 AC006539.2-201ENST00000601729 572 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 SNORA35B-201ENST00000607417 129 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 AC112503.1-201ENST00000608436 391 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 AC069200.1-201ENST00000609511 323 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 AC107871.2-201ENST00000612894 502 ntBASIC2.58□□□□□ -2
TRAV27A0A087WT01 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRAV27A0A087WT01 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRAV27A0A087WT01 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRAV27A0A087WT01 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.57□□□□□ -2
TRAV27A0A087WT01 XPOTP1-201ENST00000443317 2398 ntBASIC2.57□□□□□ -2
TRAV27A0A087WT01 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRAV27A0A087WT01 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
TRAV27A0A087WT01 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TRAV27A0A087WT01 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
TRAV27A0A087WT01 DYNLT3P1-201ENST00000378574 347 ntBASIC2.57□□□□□ -2
TRAV27A0A087WT01 MIR34B-201ENST00000385076 84 ntBASIC2.57□□□□□ -2
TRAV27A0A087WT01 AL590004.2-201ENST00000404787 371 ntBASIC2.57□□□□□ -2
TRAV27A0A087WT01 RNA5SP129-201ENST00000410276 118 ntBASIC2.57□□□□□ -2
TRAV27A0A087WT01 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.57□□□□□ -2
TRAV27A0A087WT01 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.57□□□□□ -2
TRAV27A0A087WT01 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms