Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 AC011352.3-201ENST00000505162 593 ntBASIC3.56□□□□□ -1.84
AP4B1Q9Y6B7 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.56□□□□□ -1.84
AP4B1Q9Y6B7 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.56□□□□□ -1.84
AP4B1Q9Y6B7 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.56□□□□□ -1.84
AP4B1Q9Y6B7 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.56□□□□□ -1.84
AP4B1Q9Y6B7 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
AP4B1Q9Y6B7 TGIF1P1-201ENST00000558095 802 ntBASIC3.56□□□□□ -1.84
AP4B1Q9Y6B7 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.56□□□□□ -1.84
AP4B1Q9Y6B7 AC012182.1-201ENST00000570133 895 ntBASIC3.56□□□□□ -1.84
AP4B1Q9Y6B7 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.56□□□□□ -1.84
AP4B1Q9Y6B7 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.56□□□□□ -1.84
AP4B1Q9Y6B7 AC011492.1-201ENST00000600023 315 ntBASIC3.56□□□□□ -1.84
AP4B1Q9Y6B7 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.56□□□□□ -1.84
AP4B1Q9Y6B7 AC099676.1-201ENST00000608886 657 ntBASIC3.56□□□□□ -1.84
AP4B1Q9Y6B7 AC090912.3-201ENST00000609775 533 ntBASIC3.56□□□□□ -1.84
AP4B1Q9Y6B7 AC105227.2-201ENST00000615075 605 ntBASIC3.56□□□□□ -1.84
AP4B1Q9Y6B7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.56□□□□□ -1.84
AP4B1Q9Y6B7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
AP4B1Q9Y6B7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.56□□□□□ -1.84
AP4B1Q9Y6B7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
AP4B1Q9Y6B7 AL359893.1-201ENST00000447628 1580 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 AP001350.1-201ENST00000601906 1524 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 RNU6-213P-201ENST00000384051 104 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 RNU6-1181P-201ENST00000384191 106 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 RNU6-441P-201ENST00000384545 106 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 MTCO2P31-201ENST00000402702 684 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 ZNF602P-201ENST00000405929 924 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 AP000567.1-201ENST00000406413 156 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 AC092638.1-201ENST00000411966 1275 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 Z97055.1-201ENST00000419730 712 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 RPL7P2-201ENST00000427639 268 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 AL158071.1-201ENST00000430315 461 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 RPL7P59-201ENST00000447700 943 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 HMGN3P1-201ENST00000453847 193 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 AC010401.1-201ENST00000463867 348 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 AL672167.3-201ENST00000465951 960 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 AC005726.1-201ENST00000494679 427 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 FCF1P3-201ENST00000496394 590 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 RPL23AP55-201ENST00000498163 452 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 RNA5SP208-201ENST00000516156 78 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 OR8K4P-201ENST00000534608 872 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 YPEL5P3-201ENST00000547227 352 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 AC107954.1-201ENST00000565906 727 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 AC010735.1-201ENST00000567305 1026 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 AC093227.2-201ENST00000589357 285 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 AC011468.4-201ENST00000603942 409 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 AC002487.1-201ENST00000604565 994 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 VN1R74P-201ENST00000613259 503 ntBASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.55□□□□□ -1.84
AP4B1Q9Y6B7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 RNA5SP295-201ENST00000362655 121 ntBASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 RN7SKP280-201ENST00000364196 304 ntBASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 RNU6-619P-201ENST00000365146 108 ntBASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 RNU6-1226P-201ENST00000384317 107 ntBASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 RNU6-837P-201ENST00000391056 108 ntBASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 SSXP10-201ENST00000402595 565 ntBASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 GSTA8P-201ENST00000404253 637 ntBASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 RNU6-55P-201ENST00000411092 107 ntBASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 RNU6-954P-201ENST00000411355 107 ntBASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 AC009237.2-201ENST00000421358 284 ntBASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 AC233981.1-201ENST00000423224 461 ntBASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 RPL21P66-201ENST00000426566 466 ntBASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 AC013262.1-201ENST00000426710 252 ntBASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 HIGD1AP12-201ENST00000427832 281 ntBASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 RPS7P2-201ENST00000435134 607 ntBASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 SNORA71B-202ENST00000439232 272 ntBASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 HMGN1P5-201ENST00000448591 263 ntBASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 Z99714.1-201ENST00000450463 807 ntBASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 RPS4XP15-201ENST00000489210 795 ntBASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 AC091860.1-201ENST00000505723 432 ntBASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 HMGB3P15-201ENST00000507326 574 ntBASIC3.54□□□□□ -1.84
AP4B1Q9Y6B7 AC118282.2-201ENST00000508739 374 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms