Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 LRRC6P1-201ENST00000532188 885 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AGGF1P8-201ENST00000562979 1000 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 MIR5685-201ENST00000579080 79 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AC006130.2-201ENST00000586202 326 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AL355812.1-201ENST00000603215 216 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AL137849.1-201ENST00000604767 169 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AC112220.2-201ENST00000605513 533 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AC024933.1-201ENST00000608472 348 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AP005137.2-201ENST00000609238 400 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AL713922.2-201ENST00000619384 716 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AL354798.1-201ENST00000622505 329 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AC098679.5-201ENST00000624394 571 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 ZNF663P-202ENST00000641770 1131 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 ZNF37BP-203ENST00000452306 1352 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 ANKRD36P1-201ENST00000344424 659 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 RNU6-251P-201ENST00000363235 104 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 RNA5SP322-201ENST00000363617 119 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 SNORD116-23-201ENST00000384645 92 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 ZNF602P-201ENST00000405929 924 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 SNORA3.3-201ENST00000408712 125 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 RN7SKP159-201ENST00000410657 292 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 CYCSP19-201ENST00000411715 316 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 AL133384.1-201ENST00000412744 351 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 RPS7P9-201ENST00000414704 586 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 MTND4P3-201ENST00000417829 541 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 USP12PY-201ENST00000427677 1064 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 AC241584.1-201ENST00000438469 1241 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 AC004022.1-201ENST00000447766 1066 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 RPL6P9-201ENST00000466502 859 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 AL139099.1-201ENST00000497398 403 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 CAB39P1-201ENST00000502277 460 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 KLRA1P-201ENST00000503499 986 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 AC008802.1-201ENST00000519121 791 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 SUMO2P20-201ENST00000520803 283 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 MTCO3P15-201ENST00000526563 574 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 AC034105.4-201ENST00000568304 277 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 AC010928.3-201ENST00000587712 541 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 AL445435.1-201ENST00000604232 665 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 AC104763.3-201ENST00000613765 618 ntBASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATG4BQ9Y4P1 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 HSPA8P1-201ENST00000425843 1833 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 RNU1-85P-201ENST00000364127 164 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 RNU6-224P-201ENST00000384055 107 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 MIR30B-201ENST00000384850 88 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 AC244098.2-201ENST00000422068 99 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 MTCYBP42-201ENST00000444653 1130 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 NDUFA5P7-201ENST00000452914 242 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 AC098824.1-201ENST00000453565 980 ntBASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.59□□□□□ -1.83
ATG4BQ9Y4P1 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms