Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CBX3P3-201ENST00000508108 532 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 MTCO1P35-201ENST00000515270 228 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 SNORA31.9-201ENST00000516429 84 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AC090281.1-201ENST00000523019 276 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AP002963.1-201ENST00000530590 184 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 SLC2A13P1-201ENST00000531560 322 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AC022880.1-201ENST00000534017 973 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AC079089.3-201ENST00000603094 673 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AC004987.4-201ENST00000603383 338 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AC010200.2-201ENST00000605098 235 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AC087752.4-201ENST00000605911 462 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AC024560.3-201ENST00000608482 349 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AL391497.1-201ENST00000608671 547 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AC012360.2-201ENST00000609349 391 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AL445567.2-201ENST00000618935 498 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AC015804.1-201ENST00000622935 435 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AP000843.1-201ENST00000624880 701 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 MIR6715B-201ENST00000637172 77 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 USP9YP4-201ENST00000424401 1745 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 AL672167.1-203ENST00000641299 2975 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 OR5BR1P-201ENST00000524992 1330 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 RNU1-20P-201ENST00000363314 162 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 MIR659-201ENST00000384963 97 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 AC092634.6-201ENST00000418558 192 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 AC233981.1-201ENST00000423224 461 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 RPL23AP65-201ENST00000475608 468 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 RN7SL41P-201ENST00000476144 297 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 KLRA1P-201ENST00000503499 986 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 AC004069.2-201ENST00000505438 1114 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 RPL7L1P13-201ENST00000511702 739 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 AC022447.1-201ENST00000515358 464 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 SNORA48.10-201ENST00000516965 160 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 MRPL49P2-201ENST00000521066 465 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 AC020914.6-201ENST00000594327 272 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 AC090181.2-201ENST00000602975 672 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 ARF4P1-201ENST00000605447 541 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 AC015540.1-201ENST00000615828 501 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 uc_338.13-201ENST00000618243 179 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 CR392039.4-201ENST00000624968 501 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 AC120349.2-201ENST00000625002 298 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 KPNA2P2-201ENST00000419546 1489 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SSX2IPQ9Y2D8 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 CPHL1P-201ENST00000461341 3407 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AC017104.4-201ENST00000636283 1592 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AL121657.1-201ENST00000327215 531 ntBASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SSX2IPQ9Y2D8 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms