Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SCN11AQ9UI33 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.56□□□□□ -1.84
SCN11AQ9UI33 AL672167.1-206ENST00000356293 943 ntBASIC3.56□□□□□ -1.84
SCN11AQ9UI33 HMGB3P23-201ENST00000414981 585 ntBASIC3.56□□□□□ -1.84
SCN11AQ9UI33 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.56□□□□□ -1.84
SCN11AQ9UI33 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.56□□□□□ -1.84
SCN11AQ9UI33 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN11AQ9UI33 SERPINE4P-201ENST00000554978 281 ntBASIC3.56□□□□□ -1.84
SCN11AQ9UI33 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN11AQ9UI33 CACYBPP2-201ENST00000453625 678 ntBASIC3.56□□□□□ -1.84
SCN11AQ9UI33 AC078817.1-201ENST00000492623 435 ntBASIC3.56□□□□□ -1.84
SCN11AQ9UI33 NIPA2P2-201ENST00000496376 1083 ntBASIC3.56□□□□□ -1.84
SCN11AQ9UI33 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
SCN11AQ9UI33 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.56□□□□□ -1.84
SCN11AQ9UI33 AP000916.1-201ENST00000533869 835 ntBASIC3.56□□□□□ -1.84
SCN11AQ9UI33 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.56□□□□□ -1.84
SCN11AQ9UI33 RN7SL371P-201ENST00000578099 267 ntBASIC3.56□□□□□ -1.84
SCN11AQ9UI33 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
SCN11AQ9UI33 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCN11AQ9UI33 MIR26A1-201ENST00000362205 77 ntBASIC3.55□□□□□ -1.84
SCN11AQ9UI33 AL360182.1-201ENST00000397433 468 ntBASIC3.55□□□□□ -1.84
SCN11AQ9UI33 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCN11AQ9UI33 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.55□□□□□ -1.84
SCN11AQ9UI33 RPS6P12-201ENST00000432491 726 ntBASIC3.55□□□□□ -1.84
SCN11AQ9UI33 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.55□□□□□ -1.84
SCN11AQ9UI33 HMGB1P18-201ENST00000438801 619 ntBASIC3.55□□□□□ -1.84
SCN11AQ9UI33 AL513043.1-201ENST00000439124 535 ntBASIC3.55□□□□□ -1.84
SCN11AQ9UI33 RN7SL75P-201ENST00000461926 281 ntBASIC3.55□□□□□ -1.84
SCN11AQ9UI33 ANXA2P1-201ENST00000505539 926 ntBASIC3.55□□□□□ -1.84
SCN11AQ9UI33 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.55□□□□□ -1.84
SCN11AQ9UI33 FAM60DP-201ENST00000524174 632 ntBASIC3.55□□□□□ -1.84
SCN11AQ9UI33 HMGB3P26-201ENST00000560051 582 ntBASIC3.55□□□□□ -1.84
SCN11AQ9UI33 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
SCN11AQ9UI33 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.55□□□□□ -1.84
SCN11AQ9UI33 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SCN11AQ9UI33 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.54□□□□□ -1.84
SCN11AQ9UI33 AC009313.2-201ENST00000417893 1941 ntBASIC3.54□□□□□ -1.84
SCN11AQ9UI33 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.54□□□□□ -1.84
SCN11AQ9UI33 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.54□□□□□ -1.84
SCN11AQ9UI33 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.54□□□□□ -1.84
SCN11AQ9UI33 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.54□□□□□ -1.84
SCN11AQ9UI33 HMGB3P8-201ENST00000449709 577 ntBASIC3.54□□□□□ -1.84
SCN11AQ9UI33 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.54□□□□□ -1.84
SCN11AQ9UI33 snoU13.26-201ENST00000459452 105 ntBASIC3.54□□□□□ -1.84
SCN11AQ9UI33 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
SCN11AQ9UI33 OR5AK3P-201ENST00000527486 1297 ntBASIC3.54□□□□□ -1.84
SCN11AQ9UI33 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.54□□□□□ -1.84
SCN11AQ9UI33 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.54□□□□□ -1.84
SCN11AQ9UI33 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.54□□□□□ -1.84
SCN11AQ9UI33 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCN11AQ9UI33 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCN11AQ9UI33 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.54□□□□□ -1.84
SCN11AQ9UI33 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SCN11AQ9UI33 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.53□□□□□ -1.84
SCN11AQ9UI33 AC125238.1-201ENST00000448842 249 ntBASIC3.53□□□□□ -1.84
SCN11AQ9UI33 RPL21P41-201ENST00000459863 264 ntBASIC3.53□□□□□ -1.84
SCN11AQ9UI33 RPS20P22-201ENST00000473700 357 ntBASIC3.53□□□□□ -1.84
SCN11AQ9UI33 AC104687.1-201ENST00000485829 412 ntBASIC3.53□□□□□ -1.84
SCN11AQ9UI33 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.53□□□□□ -1.84
SCN11AQ9UI33 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.53□□□□□ -1.84
SCN11AQ9UI33 Y_RNA.676-201ENST00000516393 96 ntBASIC3.53□□□□□ -1.84
SCN11AQ9UI33 MTCYBP19-201ENST00000517463 1124 ntBASIC3.53□□□□□ -1.84
SCN11AQ9UI33 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.53□□□□□ -1.84
SCN11AQ9UI33 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.53□□□□□ -1.84
SCN11AQ9UI33 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.53□□□□□ -1.84
SCN11AQ9UI33 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.53□□□□□ -1.84
SCN11AQ9UI33 TAB3P1-202ENST00000452645 1634 ntBASIC3.53□□□□□ -1.84
SCN11AQ9UI33 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.53□□□□□ -1.84
SCN11AQ9UI33 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SCN11AQ9UI33 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.53□□□□□ -1.84
SCN11AQ9UI33 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
SCN11AQ9UI33 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SCN11AQ9UI33 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
SCN11AQ9UI33 RNU6-984P-201ENST00000363236 109 ntBASIC3.53□□□□□ -1.84
SCN11AQ9UI33 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SCN11AQ9UI33 AC099063.2-201ENST00000446360 662 ntBASIC3.53□□□□□ -1.84
SCN11AQ9UI33 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.53□□□□□ -1.84
SCN11AQ9UI33 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.53□□□□□ -1.84
SCN11AQ9UI33 OR9N1P-201ENST00000491296 333 ntBASIC3.53□□□□□ -1.84
SCN11AQ9UI33 PDCL2P2-201ENST00000533651 189 ntBASIC3.53□□□□□ -1.84
SCN11AQ9UI33 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.53□□□□□ -1.84
SCN11AQ9UI33 AC090312.2-201ENST00000582687 378 ntBASIC3.53□□□□□ -1.84
SCN11AQ9UI33 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.53□□□□□ -1.84
SCN11AQ9UI33 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.53□□□□□ -1.84
SCN11AQ9UI33 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.53□□□□□ -1.84
SCN11AQ9UI33 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.52□□□□□ -1.85
SCN11AQ9UI33 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.52□□□□□ -1.85
SCN11AQ9UI33 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SCN11AQ9UI33 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SCN11AQ9UI33 MIR148B-201ENST00000362252 99 ntBASIC3.52□□□□□ -1.85
SCN11AQ9UI33 RNA5SP289-201ENST00000362332 137 ntBASIC3.52□□□□□ -1.85
SCN11AQ9UI33 AC009963.1-201ENST00000417265 157 ntBASIC3.52□□□□□ -1.85
SCN11AQ9UI33 YPEL5P1-201ENST00000419731 367 ntBASIC3.52□□□□□ -1.85
SCN11AQ9UI33 AC007563.3-201ENST00000433233 371 ntBASIC3.52□□□□□ -1.85
SCN11AQ9UI33 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SCN11AQ9UI33 AC093278.1-201ENST00000494700 600 ntBASIC3.52□□□□□ -1.85
SCN11AQ9UI33 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.52□□□□□ -1.85
SCN11AQ9UI33 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.52□□□□□ -1.85
SCN11AQ9UI33 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.52□□□□□ -1.85
SCN11AQ9UI33 RPS27AP18-201ENST00000515536 459 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms