Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 AC005351.1-201ENST00000511152 786 ntBASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 IGKV2-36-201ENST00000519999 223 ntBASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 TRAV37-201ENST00000553906 342 ntBASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 MIR3690-201ENST00000580266 75 ntBASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 CCDC58P3-201ENST00000590792 430 ntBASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 AC245128.3-201ENST00000594721 748 ntBASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 ELOCP35-201ENST00000604289 336 ntBASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 AC019176.2-201ENST00000611579 315 ntBASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 AC100793.4-201ENST00000613683 429 ntBASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 AL672296.1-201ENST00000427780 2158 ntBASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 AL122126.1-201ENST00000546905 1318 ntBASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 SNORA7.4-201ENST00000384249 137 ntBASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 U3.19-201ENST00000390893 196 ntBASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 AL355379.1-201ENST00000405542 640 ntBASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 RNA5SP274-201ENST00000410484 108 ntBASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 AC092017.2-201ENST00000427600 362 ntBASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 AC006028.1-201ENST00000438379 402 ntBASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 RN7SL863P-201ENST00000462370 296 ntBASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 VN1R17P-201ENST00000472048 1090 ntBASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 RPS27AP1-201ENST00000475545 471 ntBASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 AC092185.1-201ENST00000491371 97 ntBASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 WBP1LP4-201ENST00000505043 344 ntBASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 AC117525.1-201ENST00000515228 503 ntBASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 RN7SKP277-201ENST00000516895 283 ntBASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 CCNG2P1-201ENST00000549521 1000 ntBASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 AC037471.2-201ENST00000564941 598 ntBASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 AC008739.3-201ENST00000603262 127 ntBASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 PRELID3BP8-201ENST00000604148 295 ntBASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 AC018692.3-201ENST00000623929 123 ntBASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 MIR4496-201ENST00000635896 61 ntBASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 MIR622-201ENST00000638396 96 ntBASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VPS29Q9UBQ0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.93
VPS29Q9UBQ0 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.96□□□□□ -1.93
VPS29Q9UBQ0 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 RNU6-386P-201ENST00000362650 107 ntBASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 SNORA51.2-201ENST00000364595 132 ntBASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 RPL7P25-201ENST00000404151 721 ntBASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 TRIAP1P1-201ENST00000427062 225 ntBASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 AC005300.1-201ENST00000428401 373 ntBASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 OR6C71P-201ENST00000432580 913 ntBASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 RPS4XP10-201ENST00000465034 731 ntBASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 AL672167.3-201ENST00000465951 960 ntBASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 AC012181.1-201ENST00000479895 423 ntBASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 AC115989.2-201ENST00000578640 563 ntBASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 AC090616.5-202ENST00000582111 297 ntBASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 AC099506.2-201ENST00000623074 221 ntBASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VPS29Q9UBQ0 AC024341.1-201ENST00000526444 1552 ntBASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 AL049737.1-201ENST00000413920 1403 ntBASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 NUP35P2-201ENST00000416748 943 ntBASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 RPS15AP40-201ENST00000419621 391 ntBASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 AC005326.1-201ENST00000429197 123 ntBASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 PSMA2P3-201ENST00000429685 675 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms