Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC097173.1-201ENST00000505862 819 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AC006390.1-201ENST00000508068 283 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AC005868.1-201ENST00000536421 331 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 EEF1B2P4-201ENST00000551398 348 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 CKS1BP3-201ENST00000600888 237 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 SNORD91B-202ENST00000608459 222 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 OR10AB1P-201ENST00000609613 938 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AC110994.2-201ENST00000635481 492 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AC010149.2-201ENST00000637608 315 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 SALL4P2-201ENST00000423288 2910 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 GNG5P1-201ENST00000255500 204 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 RNY4P34-201ENST00000364779 95 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 RNU6-359P-201ENST00000365466 108 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 RNU1-106P-201ENST00000384382 164 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 SNORA70E-201ENST00000384492 135 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 MT-TC-201ENST00000387405 66 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 RNU2-8P-201ENST00000410727 190 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 AC016397.1-201ENST00000412463 242 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 EZH2P1-201ENST00000431167 291 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 AC009961.2-201ENST00000435771 251 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 ARPC3P1-201ENST00000437218 533 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 RPL17P49-201ENST00000443728 411 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 AC104634.1-201ENST00000452720 462 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 RPS4XP10-201ENST00000465034 731 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 RN7SL441P-201ENST00000492388 296 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 RPL9P6-201ENST00000492764 598 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 Y_RNA.672-201ENST00000516289 104 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 AC022616.6-201ENST00000520479 119 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 AP003122.4-201ENST00000530980 758 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 NDUFB4P11-201ENST00000560510 395 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 MIR4480-201ENST00000582492 71 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 HMGN1P30-201ENST00000589286 268 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 RNU6-87P-201ENST00000607561 108 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 AC007684.1-201ENST00000609671 477 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 AP002799.1-201ENST00000623552 423 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 OR5H6-203ENST00000642105 978 ntBASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCM2LQ9NUG4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AC022893.2-201ENST00000564832 3296 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 OR4G2P-201ENST00000328113 903 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 Y_RNA.296-201ENST00000364930 108 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms