Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RNU1-140P-201ENST00000365040 165 ntBASIC3.11□□□□□ -1.91
CISHQ9NSE2 SNORA9.2-201ENST00000365361 133 ntBASIC3.11□□□□□ -1.91
CISHQ9NSE2 MIR128-1-201ENST00000384921 82 ntBASIC3.11□□□□□ -1.91
CISHQ9NSE2 SNORA48.2-201ENST00000390926 124 ntBASIC3.11□□□□□ -1.91
CISHQ9NSE2 CCNB2P1-201ENST00000399411 1150 ntBASIC3.11□□□□□ -1.91
CISHQ9NSE2 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.11□□□□□ -1.91
CISHQ9NSE2 DUTP6-201ENST00000425573 462 ntBASIC3.11□□□□□ -1.91
CISHQ9NSE2 ELOCP6-201ENST00000429066 328 ntBASIC3.11□□□□□ -1.91
CISHQ9NSE2 ARF4P2-201ENST00000430209 526 ntBASIC3.11□□□□□ -1.91
CISHQ9NSE2 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.11□□□□□ -1.91
CISHQ9NSE2 CYCSP32-201ENST00000440548 321 ntBASIC3.11□□□□□ -1.91
CISHQ9NSE2 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.11□□□□□ -1.91
CISHQ9NSE2 ELOCP12-201ENST00000458706 328 ntBASIC3.11□□□□□ -1.91
CISHQ9NSE2 RPS4XP13-201ENST00000483219 789 ntBASIC3.11□□□□□ -1.91
CISHQ9NSE2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.11□□□□□ -1.91
CISHQ9NSE2 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.11□□□□□ -1.91
CISHQ9NSE2 IGKV2-23-201ENST00000518729 323 ntBASIC3.11□□□□□ -1.91
CISHQ9NSE2 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.11□□□□□ -1.91
CISHQ9NSE2 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.11□□□□□ -1.91
CISHQ9NSE2 AC022080.3-201ENST00000544433 482 ntBASIC3.11□□□□□ -1.91
CISHQ9NSE2 OR4U1P-201ENST00000554958 912 ntBASIC3.11□□□□□ -1.91
CISHQ9NSE2 AC034105.3-201ENST00000565294 442 ntBASIC3.11□□□□□ -1.91
CISHQ9NSE2 AC022884.3-201ENST00000579571 248 ntBASIC3.11□□□□□ -1.91
CISHQ9NSE2 NF1P5-201ENST00000588287 448 ntBASIC3.11□□□□□ -1.91
CISHQ9NSE2 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.11□□□□□ -1.91
CISHQ9NSE2 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.11□□□□□ -1.91
CISHQ9NSE2 AL354950.1-201ENST00000614150 568 ntBASIC3.11□□□□□ -1.91
CISHQ9NSE2 AC018816.2-201ENST00000621460 353 ntBASIC3.11□□□□□ -1.91
CISHQ9NSE2 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CISHQ9NSE2 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CISHQ9NSE2 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CISHQ9NSE2 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CISHQ9NSE2 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CISHQ9NSE2 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.1□□□□□ -1.91
CISHQ9NSE2 AL353898.1-201ENST00000444055 238 ntBASIC3.1□□□□□ -1.91
CISHQ9NSE2 AC140076.1-201ENST00000449897 361 ntBASIC3.1□□□□□ -1.91
CISHQ9NSE2 RPS20P32-201ENST00000456044 356 ntBASIC3.1□□□□□ -1.91
CISHQ9NSE2 RPS29P26-201ENST00000477483 171 ntBASIC3.1□□□□□ -1.91
CISHQ9NSE2 TMED11P-201ENST00000479478 690 ntBASIC3.1□□□□□ -1.91
CISHQ9NSE2 AC083906.5-201ENST00000503722 328 ntBASIC3.1□□□□□ -1.91
CISHQ9NSE2 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.1□□□□□ -1.91
CISHQ9NSE2 SCGB1D5P-201ENST00000515134 247 ntBASIC3.1□□□□□ -1.91
CISHQ9NSE2 RNU2-58P-201ENST00000516403 183 ntBASIC3.1□□□□□ -1.91
CISHQ9NSE2 SNORA74D-201ENST00000516404 141 ntBASIC3.1□□□□□ -1.91
CISHQ9NSE2 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
CISHQ9NSE2 AC107016.2-201ENST00000547968 190 ntBASIC3.1□□□□□ -1.91
CISHQ9NSE2 ZNF192P1-203ENST00000565888 810 ntBASIC3.1□□□□□ -1.91
CISHQ9NSE2 AL450489.1-201ENST00000612071 468 ntBASIC3.1□□□□□ -1.91
CISHQ9NSE2 AC009039.2-201ENST00000624524 529 ntBASIC3.1□□□□□ -1.91
CISHQ9NSE2 AP001148.1-201ENST00000624124 2359 ntBASIC3.1□□□□□ -1.91
CISHQ9NSE2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CISHQ9NSE2 ZNF833P-201ENST00000424938 1494 ntBASIC3.09□□□□□ -1.91
CISHQ9NSE2 AL353743.4-201ENST00000422653 1547 ntBASIC3.09□□□□□ -1.91
CISHQ9NSE2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CISHQ9NSE2 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CISHQ9NSE2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CISHQ9NSE2 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.09□□□□□ -1.91
CISHQ9NSE2 RNU6-851P-201ENST00000384565 107 ntBASIC3.09□□□□□ -1.91
CISHQ9NSE2 SNORA44-201ENST00000384584 132 ntBASIC3.09□□□□□ -1.91
CISHQ9NSE2 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.09□□□□□ -1.91
CISHQ9NSE2 RN7SKP58-201ENST00000411010 305 ntBASIC3.09□□□□□ -1.91
CISHQ9NSE2 RPL23AP83-201ENST00000434984 473 ntBASIC3.09□□□□□ -1.91
CISHQ9NSE2 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.09□□□□□ -1.91
CISHQ9NSE2 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.09□□□□□ -1.91
CISHQ9NSE2 RNU7-170P-201ENST00000459303 61 ntBASIC3.09□□□□□ -1.91
CISHQ9NSE2 AC011825.1-201ENST00000484967 388 ntBASIC3.09□□□□□ -1.91
CISHQ9NSE2 MTATP6P22-201ENST00000507369 598 ntBASIC3.09□□□□□ -1.91
CISHQ9NSE2 AC113398.2-201ENST00000507630 558 ntBASIC3.09□□□□□ -1.91
CISHQ9NSE2 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CISHQ9NSE2 FAM60DP-201ENST00000524174 632 ntBASIC3.09□□□□□ -1.91
CISHQ9NSE2 AC113192.3-201ENST00000529152 742 ntBASIC3.09□□□□□ -1.91
CISHQ9NSE2 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.09□□□□□ -1.91
CISHQ9NSE2 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.09□□□□□ -1.91
CISHQ9NSE2 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.09□□□□□ -1.91
CISHQ9NSE2 AP003117.1-201ENST00000602771 554 ntBASIC3.09□□□□□ -1.91
CISHQ9NSE2 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.09□□□□□ -1.91
CISHQ9NSE2 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CISHQ9NSE2 AC006065.5-201ENST00000623427 349 ntBASIC3.09□□□□□ -1.91
CISHQ9NSE2 AL355596.1-201ENST00000565399 3996 ntBASIC3.09□□□□□ -1.91
CISHQ9NSE2 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CISHQ9NSE2 AC096644.4-201ENST00000563417 2912 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 RNU1-35P-201ENST00000362782 153 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 RNU6-1251P-201ENST00000364502 107 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CISHQ9NSE2 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.08□□□□□ -1.92
CISHQ9NSE2 RNU6-532P-201ENST00000384318 107 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.08□□□□□ -1.92
CISHQ9NSE2 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.08□□□□□ -1.92
CISHQ9NSE2 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 AC009237.5-201ENST00000414271 501 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 EEF1A1P41-201ENST00000414667 207 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 AC007390.1-201ENST00000415722 356 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.08□□□□□ -1.92
CISHQ9NSE2 AL139132.1-201ENST00000431587 344 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.08□□□□□ -1.92
CISHQ9NSE2 MTCYBP29-201ENST00000436327 1006 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CISHQ9NSE2 NANOGNBP1-201ENST00000448444 480 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 RPL21P103-201ENST00000479921 488 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 AP004217.1-201ENST00000480579 346 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms