Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 BNIP3P11-201ENST00000603878 563 ntBASIC5.17□□□□□ -1.58
CD248Q9HCU0 AL031320.1-201ENST00000604177 357 ntBASIC5.17□□□□□ -1.58
CD248Q9HCU0 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CD248Q9HCU0 AC011626.1-201ENST00000604710 562 ntBASIC5.17□□□□□ -1.58
CD248Q9HCU0 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.17□□□□□ -1.58
CD248Q9HCU0 AC008277.2-201ENST00000605196 797 ntBASIC5.17□□□□□ -1.58
CD248Q9HCU0 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.17□□□□□ -1.58
CD248Q9HCU0 AL590282.1-201ENST00000610379 1136 ntBASIC5.17□□□□□ -1.58
CD248Q9HCU0 Y_RNA.812-201ENST00000610788 101 ntBASIC5.17□□□□□ -1.58
CD248Q9HCU0 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CD248Q9HCU0 AC135507.2-201ENST00000612443 309 ntBASIC5.17□□□□□ -1.58
CD248Q9HCU0 Y_RNA.784-201ENST00000613803 101 ntBASIC5.17□□□□□ -1.58
CD248Q9HCU0 Y_RNA.787-201ENST00000616522 101 ntBASIC5.17□□□□□ -1.58
CD248Q9HCU0 Y_RNA.780-201ENST00000617336 101 ntBASIC5.17□□□□□ -1.58
CD248Q9HCU0 Y_RNA.801-201ENST00000619005 101 ntBASIC5.17□□□□□ -1.58
CD248Q9HCU0 AL359880.1-201ENST00000621879 266 ntBASIC5.17□□□□□ -1.58
CD248Q9HCU0 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.17□□□□□ -1.58
CD248Q9HCU0 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CD248Q9HCU0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CD248Q9HCU0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CD248Q9HCU0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
CD248Q9HCU0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CD248Q9HCU0 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CD248Q9HCU0 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CD248Q9HCU0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CD248Q9HCU0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CD248Q9HCU0 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 NSRP1P1-201ENST00000444067 1693 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CD248Q9HCU0 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CD248Q9HCU0 RNU6-543P-201ENST00000362576 108 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 Y_RNA.89-201ENST00000363031 102 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 RNU6-1090P-201ENST00000364065 94 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 RNU6-534P-201ENST00000364877 106 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 GAPDHP49-201ENST00000421421 961 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 AC093698.1-201ENST00000423843 571 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 AL138785.1-201ENST00000425821 331 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 MTCYBP45-201ENST00000435243 565 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 HMGB1P45-201ENST00000435986 653 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 EEF1A1P1-201ENST00000447052 739 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 RPL39P6-201ENST00000448289 150 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 AL033528.1-201ENST00000453780 140 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 OR6K1P-201ENST00000456766 971 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 AC108751.2-201ENST00000469993 231 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 RN7SL814P-201ENST00000487715 300 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 RPS24P16-201ENST00000497294 392 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 AC019235.1-201ENST00000503847 207 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 AC022360.1-201ENST00000521058 340 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CD248Q9HCU0 AC083923.1-201ENST00000523708 376 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 AC022882.1-201ENST00000532142 501 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 GSTP1P1-201ENST00000548078 319 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 DYNLL1P4-201ENST00000549314 266 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 AC079075.1-201ENST00000559543 878 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 BNIP3P4-201ENST00000604946 565 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 AL355816.1-201ENST00000607951 118 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 AC107214.2-201ENST00000608204 634 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 AC019193.2-201ENST00000610012 634 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 AL442067.2-201ENST00000614033 363 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 STMN1P1-201ENST00000617809 440 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 AL445264.1-201ENST00000621719 171 ntBASIC5.16□□□□□ -1.58
CD248Q9HCU0 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CD248Q9HCU0 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CD248Q9HCU0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CD248Q9HCU0 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CD248Q9HCU0 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.15□□□□□ -1.58
CD248Q9HCU0 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CD248Q9HCU0 SAGE2P-201ENST00000420011 2126 ntBASIC5.15□□□□□ -1.58
CD248Q9HCU0 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CD248Q9HCU0 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms