Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 AC015908.1-201ENST00000478739 476 ntBASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 AC069528.1-202ENST00000482888 637 ntBASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 CAB39P1-201ENST00000502277 460 ntBASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 MLLT10P2-201ENST00000506434 249 ntBASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 HMGB3P15-201ENST00000507326 574 ntBASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 AC092747.2-201ENST00000545069 983 ntBASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 MTND6P33-201ENST00000571794 183 ntBASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 MIR5684-201ENST00000585074 65 ntBASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 XIAPP1-201ENST00000603162 600 ntBASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 AL391261.4-201ENST00000616012 481 ntBASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 AC040168.1-201ENST00000623594 991 ntBASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 MAPK10-373ENST00000641983 6772 ntBASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CHMP4AQ9BY43 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 SNORD3H-201ENST00000384486 214 ntBASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 AL590704.1-201ENST00000402856 794 ntBASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 RAC1P8-201ENST00000427086 527 ntBASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 AC079804.1-201ENST00000461922 436 ntBASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 AC087312.1-201ENST00000471411 480 ntBASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 AC006517.1-201ENST00000480485 328 ntBASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 HIGD1AP10-201ENST00000527837 282 ntBASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 AC025627.2-201ENST00000576220 160 ntBASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 MIR4286-201ENST00000580651 93 ntBASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 AC093227.2-201ENST00000589357 285 ntBASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 DNAJC19P3-201ENST00000594491 331 ntBASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 AL355810.1-201ENST00000614629 552 ntBASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 OR1S1-201ENST00000624470 978 ntBASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHMP4AQ9BY43 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 AC090740.1-201ENST00000623193 2262 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 Y_RNA.25-201ENST00000362528 102 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 RNU6-173P-201ENST00000364215 104 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 RNA5SP130-201ENST00000364431 114 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 RPS3AP26-201ENST00000398259 784 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 AMD1P2-201ENST00000412936 992 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 RPF2P1-201ENST00000424137 906 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 OR4C10P-201ENST00000434991 931 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 USP9YP22-201ENST00000438971 294 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 SLC31A1P1-201ENST00000451221 567 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 NECAP1P2-201ENST00000455668 727 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 RN7SL330P-201ENST00000469709 307 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 ST13P14-201ENST00000474095 734 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 RPS27AP1-201ENST00000475545 471 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 AC093824.1-201ENST00000508796 343 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 AC108043.1-201ENST00000512696 574 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 AC112198.4-201ENST00000515450 351 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 RNU7-143P-201ENST00000516781 65 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 AC023825.1-201ENST00000566704 1030 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 RPL23AP87-202ENST00000573039 466 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 AC124312.4-201ENST00000605533 310 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 AC069545.1-201ENST00000605671 358 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 AL512427.1-201ENST00000618593 349 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 AL139089.1-201ENST00000620372 975 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 AC007256.1-201ENST00000392253 2765 ntBASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHMP4AQ9BY43 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CHMP4AQ9BY43 RNU6-1074P-201ENST00000383995 104 ntBASIC5.23□□□□□ -1.57
CHMP4AQ9BY43 MIR1251-201ENST00000408552 70 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms