Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.12□□□□□ -1.75
RAD9AQ99638 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.12□□□□□ -1.75
RAD9AQ99638 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.12□□□□□ -1.75
RAD9AQ99638 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.12□□□□□ -1.75
RAD9AQ99638 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.12□□□□□ -1.75
RAD9AQ99638 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.12□□□□□ -1.75
RAD9AQ99638 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.12□□□□□ -1.75
RAD9AQ99638 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.12□□□□□ -1.75
RAD9AQ99638 AC104662.1-201ENST00000604448 511 ntBASIC4.12□□□□□ -1.75
RAD9AQ99638 RNU1-30P-201ENST00000606575 163 ntBASIC4.12□□□□□ -1.75
RAD9AQ99638 AC106052.1-201ENST00000608029 497 ntBASIC4.12□□□□□ -1.75
RAD9AQ99638 AP000238.1-201ENST00000608759 426 ntBASIC4.12□□□□□ -1.75
RAD9AQ99638 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.12□□□□□ -1.75
RAD9AQ99638 MIR3651-201ENST00000630427 90 ntBASIC4.12□□□□□ -1.75
RAD9AQ99638 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.12□□□□□ -1.75
RAD9AQ99638 AL392088.2-201ENST00000637607 285 ntBASIC4.12□□□□□ -1.75
RAD9AQ99638 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.12□□□□□ -1.75
RAD9AQ99638 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.12□□□□□ -1.75
RAD9AQ99638 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RAD9AQ99638 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.12□□□□□ -1.75
RAD9AQ99638 MARK2P15-201ENST00000432204 2186 ntBASIC4.12□□□□□ -1.75
RAD9AQ99638 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RAD9AQ99638 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RAD9AQ99638 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RAD9AQ99638 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RAD9AQ99638 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RAD9AQ99638 RNU4-51P-201ENST00000364206 140 ntBASIC4.11□□□□□ -1.75
RAD9AQ99638 RNU6-619P-201ENST00000365146 108 ntBASIC4.11□□□□□ -1.75
RAD9AQ99638 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.11□□□□□ -1.75
RAD9AQ99638 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.11□□□□□ -1.75
RAD9AQ99638 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
RAD9AQ99638 SNORD116-12-201ENST00000384468 92 ntBASIC4.11□□□□□ -1.75
RAD9AQ99638 TMSB4XP8-201ENST00000402089 135 ntBASIC4.11□□□□□ -1.75
RAD9AQ99638 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.11□□□□□ -1.75
RAD9AQ99638 TMSB4XP6-201ENST00000415187 135 ntBASIC4.11□□□□□ -1.75
RAD9AQ99638 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.11□□□□□ -1.75
RAD9AQ99638 TMSB4XP1-201ENST00000424567 135 ntBASIC4.11□□□□□ -1.75
RAD9AQ99638 AC092648.1-201ENST00000425870 423 ntBASIC4.11□□□□□ -1.75
RAD9AQ99638 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.11□□□□□ -1.75
RAD9AQ99638 AC097713.2-201ENST00000430199 356 ntBASIC4.11□□□□□ -1.75
RAD9AQ99638 USP9YP24-201ENST00000434374 697 ntBASIC4.11□□□□□ -1.75
RAD9AQ99638 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.11□□□□□ -1.75
RAD9AQ99638 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.11□□□□□ -1.75
RAD9AQ99638 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.11□□□□□ -1.75
RAD9AQ99638 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.11□□□□□ -1.75
RAD9AQ99638 USP9YP17-201ENST00000444617 696 ntBASIC4.11□□□□□ -1.75
RAD9AQ99638 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.11□□□□□ -1.75
RAD9AQ99638 AC092045.1-201ENST00000495716 1231 ntBASIC4.11□□□□□ -1.75
RAD9AQ99638 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.11□□□□□ -1.75
RAD9AQ99638 AC139783.2-201ENST00000504847 1145 ntBASIC4.11□□□□□ -1.75
RAD9AQ99638 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.11□□□□□ -1.75
RAD9AQ99638 AC110792.2-201ENST00000510278 224 ntBASIC4.11□□□□□ -1.75
RAD9AQ99638 AC090281.1-201ENST00000523019 276 ntBASIC4.11□□□□□ -1.75
RAD9AQ99638 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.11□□□□□ -1.75
RAD9AQ99638 CBX3P5-201ENST00000552017 521 ntBASIC4.11□□□□□ -1.75
RAD9AQ99638 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.11□□□□□ -1.75
RAD9AQ99638 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.11□□□□□ -1.75
RAD9AQ99638 AGGF1P5-201ENST00000567900 919 ntBASIC4.11□□□□□ -1.75
RAD9AQ99638 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.11□□□□□ -1.75
RAD9AQ99638 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.11□□□□□ -1.75
RAD9AQ99638 LLPHP1-201ENST00000603571 367 ntBASIC4.11□□□□□ -1.75
RAD9AQ99638 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.11□□□□□ -1.75
RAD9AQ99638 AC009237.15-201ENST00000610252 501 ntBASIC4.11□□□□□ -1.75
RAD9AQ99638 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.11□□□□□ -1.75
RAD9AQ99638 AC010975.3-201ENST00000618727 978 ntBASIC4.11□□□□□ -1.75
RAD9AQ99638 AC004943.3-201ENST00000624116 600 ntBASIC4.11□□□□□ -1.75
RAD9AQ99638 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.11□□□□□ -1.75
RAD9AQ99638 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.11□□□□□ -1.75
RAD9AQ99638 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RAD9AQ99638 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RAD9AQ99638 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.11□□□□□ -1.75
RAD9AQ99638 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RAD9AQ99638 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RAD9AQ99638 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RAD9AQ99638 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RAD9AQ99638 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RAD9AQ99638 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RAD9AQ99638 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RAD9AQ99638 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.1□□□□□ -1.75
RAD9AQ99638 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
RAD9AQ99638 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RAD9AQ99638 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RAD9AQ99638 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RAD9AQ99638 RNA5SP50-201ENST00000363731 107 ntBASIC4.1□□□□□ -1.75
RAD9AQ99638 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RAD9AQ99638 ANAPC10P1-201ENST00000395991 556 ntBASIC4.1□□□□□ -1.75
RAD9AQ99638 SFR1P1-201ENST00000403720 688 ntBASIC4.1□□□□□ -1.75
RAD9AQ99638 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.1□□□□□ -1.75
RAD9AQ99638 RNU6-575P-201ENST00000411326 105 ntBASIC4.1□□□□□ -1.75
RAD9AQ99638 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.1□□□□□ -1.75
RAD9AQ99638 RPL7P53-201ENST00000421245 739 ntBASIC4.1□□□□□ -1.75
RAD9AQ99638 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.1□□□□□ -1.75
RAD9AQ99638 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.1□□□□□ -1.75
RAD9AQ99638 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.1□□□□□ -1.75
RAD9AQ99638 MTND2P5-201ENST00000432656 1006 ntBASIC4.1□□□□□ -1.75
RAD9AQ99638 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.1□□□□□ -1.75
RAD9AQ99638 HMGB1P37-201ENST00000439613 609 ntBASIC4.1□□□□□ -1.75
RAD9AQ99638 AC092641.1-201ENST00000440229 772 ntBASIC4.1□□□□□ -1.75
RAD9AQ99638 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.1□□□□□ -1.75
RAD9AQ99638 HMGB3P6-201ENST00000444896 598 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms