Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AC140479.6-201ENST00000633535 357 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUP88Q99567 MAPK10-286ENST00000641208 8747 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUP88Q99567 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NUP88Q99567 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NUP88Q99567 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NUP88Q99567 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NUP88Q99567 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUP88Q99567 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUP88Q99567 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
NUP88Q99567 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NUP88Q99567 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.09□□□□□ -1.59
NUP88Q99567 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NUP88Q99567 LINC00561-201ENST00000565815 2738 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
NUP88Q99567 MAPK10-304ENST00000641341 3984 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NUP88Q99567 MIR383-201ENST00000362257 73 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 Y_RNA.77-201ENST00000362962 107 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 Y_RNA.318-201ENST00000365131 97 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.09□□□□□ -1.59
NUP88Q99567 AC007066.1-201ENST00000392902 381 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 RPS3AP26-201ENST00000398259 784 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 SNORA11F-201ENST00000408237 128 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 MORF4L1P6-201ENST00000418771 268 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 OR51AB1P-201ENST00000429046 620 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 PSMA2P3-201ENST00000429685 675 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.09□□□□□ -1.59
NUP88Q99567 OR4C10P-201ENST00000434991 931 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 AL356276.2-201ENST00000435919 558 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 SNRPEP7-201ENST00000438350 220 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 AL117351.1-201ENST00000438864 766 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.09□□□□□ -1.59
NUP88Q99567 MTND1P29-201ENST00000448112 647 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.09□□□□□ -1.59
NUP88Q99567 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.09□□□□□ -1.59
NUP88Q99567 KATNBL1P6-201ENST00000453433 915 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.09□□□□□ -1.59
NUP88Q99567 AC017015.1-201ENST00000477387 286 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.09□□□□□ -1.59
NUP88Q99567 AC108022.1-201ENST00000493466 478 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 AC108941.1-201ENST00000502853 530 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 AC093767.1-201ENST00000504523 156 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.09□□□□□ -1.59
NUP88Q99567 AC006499.2-201ENST00000513470 337 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 NDUFA5P2-201ENST00000519723 344 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.09□□□□□ -1.59
NUP88Q99567 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.09□□□□□ -1.59
NUP88Q99567 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.09□□□□□ -1.59
NUP88Q99567 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.09□□□□□ -1.59
NUP88Q99567 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.09□□□□□ -1.59
NUP88Q99567 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NUP88Q99567 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.09□□□□□ -1.59
NUP88Q99567 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.09□□□□□ -1.59
NUP88Q99567 MIR4458-201ENST00000578872 75 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.09□□□□□ -1.59
NUP88Q99567 AC008966.2-201ENST00000606157 453 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 AL513477.2-201ENST00000607858 568 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 AC092653.1-201ENST00000608509 531 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 ZYXP1-201ENST00000617638 118 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 AL445363.3-201ENST00000623080 671 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.09□□□□□ -1.59
NUP88Q99567 AC130650.2-201ENST00000618736 2403 ntBASIC5.09□□□□□ -1.59
NUP88Q99567 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
NUP88Q99567 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NUP88Q99567 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
NUP88Q99567 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.09□□□□□ -1.6
NUP88Q99567 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.08□□□□□ -1.6
NUP88Q99567 CR383658.2-201ENST00000547576 1525 ntBASIC5.08□□□□□ -1.6
NUP88Q99567 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUP88Q99567 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.08□□□□□ -1.6
NUP88Q99567 OR4G11P-202ENST00000642116 1414 ntBASIC5.08□□□□□ -1.6
NUP88Q99567 RNU6-462P-201ENST00000362659 105 ntBASIC5.08□□□□□ -1.6
NUP88Q99567 RNVU1-3-201ENST00000364313 161 ntBASIC5.08□□□□□ -1.6
NUP88Q99567 ARF4P3-201ENST00000397387 509 ntBASIC5.08□□□□□ -1.6
NUP88Q99567 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.08□□□□□ -1.6
NUP88Q99567 RPL7P30-201ENST00000420888 709 ntBASIC5.08□□□□□ -1.6
NUP88Q99567 AL049610.1-201ENST00000423374 372 ntBASIC5.08□□□□□ -1.6
NUP88Q99567 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.08□□□□□ -1.6
NUP88Q99567 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.08□□□□□ -1.6
NUP88Q99567 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.08□□□□□ -1.6
NUP88Q99567 RPL23AP74-201ENST00000437246 471 ntBASIC5.08□□□□□ -1.6
NUP88Q99567 AL450263.2-201ENST00000439400 589 ntBASIC5.08□□□□□ -1.6
NUP88Q99567 MTND6P18-201ENST00000439477 513 ntBASIC5.08□□□□□ -1.6
NUP88Q99567 AC114495.1-201ENST00000441274 436 ntBASIC5.08□□□□□ -1.6
NUP88Q99567 RPL7AP28-201ENST00000464513 571 ntBASIC5.08□□□□□ -1.6
NUP88Q99567 RPL35AP15-201ENST00000468042 339 ntBASIC5.08□□□□□ -1.6
NUP88Q99567 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NUP88Q99567 AC087385.1-201ENST00000475062 312 ntBASIC5.08□□□□□ -1.6
NUP88Q99567 RPL23AP65-201ENST00000475608 468 ntBASIC5.08□□□□□ -1.6
NUP88Q99567 RN7SL691P-201ENST00000494487 301 ntBASIC5.08□□□□□ -1.6
NUP88Q99567 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.08□□□□□ -1.6
NUP88Q99567 AC008958.1-201ENST00000511047 682 ntBASIC5.08□□□□□ -1.6
NUP88Q99567 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.08□□□□□ -1.6
NUP88Q99567 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NUP88Q99567 IGLVIV-53-201ENST00000520107 367 ntBASIC5.08□□□□□ -1.6
NUP88Q99567 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NUP88Q99567 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms