Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AL590639.1-201ENST00000456484 337 ntBASIC4.58□□□□□ -1.68
IFT140Q96RY7 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.58□□□□□ -1.68
IFT140Q96RY7 OR5H5P-201ENST00000503164 928 ntBASIC4.58□□□□□ -1.68
IFT140Q96RY7 RNA5SP217-201ENST00000515959 91 ntBASIC4.58□□□□□ -1.68
IFT140Q96RY7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.58□□□□□ -1.68
IFT140Q96RY7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.58□□□□□ -1.68
IFT140Q96RY7 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.58□□□□□ -1.68
IFT140Q96RY7 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.58□□□□□ -1.68
IFT140Q96RY7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
IFT140Q96RY7 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.57□□□□□ -1.68
IFT140Q96RY7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
IFT140Q96RY7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
IFT140Q96RY7 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
IFT140Q96RY7 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.57□□□□□ -1.68
IFT140Q96RY7 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.57□□□□□ -1.68
IFT140Q96RY7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.57□□□□□ -1.68
IFT140Q96RY7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
IFT140Q96RY7 HMGN1P18-201ENST00000457642 277 ntBASIC4.57□□□□□ -1.68
IFT140Q96RY7 AC005351.1-201ENST00000511152 786 ntBASIC4.57□□□□□ -1.68
IFT140Q96RY7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.57□□□□□ -1.68
IFT140Q96RY7 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.57□□□□□ -1.68
IFT140Q96RY7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC4.57□□□□□ -1.68
IFT140Q96RY7 RNA5SP502-201ENST00000362694 119 ntBASIC4.56□□□□□ -1.68
IFT140Q96RY7 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
IFT140Q96RY7 AL139415.2-201ENST00000431968 163 ntBASIC4.56□□□□□ -1.68
IFT140Q96RY7 HMGB3P6-201ENST00000444896 598 ntBASIC4.56□□□□□ -1.68
IFT140Q96RY7 RPL23AP15-201ENST00000450202 459 ntBASIC4.56□□□□□ -1.68
IFT140Q96RY7 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.56□□□□□ -1.68
IFT140Q96RY7 AC126121.1-201ENST00000482313 553 ntBASIC4.56□□□□□ -1.68
IFT140Q96RY7 AC108078.3-201ENST00000502633 489 ntBASIC4.56□□□□□ -1.68
IFT140Q96RY7 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.56□□□□□ -1.68
IFT140Q96RY7 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.56□□□□□ -1.68
IFT140Q96RY7 AL354950.1-201ENST00000614150 568 ntBASIC4.56□□□□□ -1.68
IFT140Q96RY7 ZNF72P-201ENST00000425869 1908 ntBASIC4.56□□□□□ -1.68
IFT140Q96RY7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
IFT140Q96RY7 MIR518C-201ENST00000384822 101 ntBASIC4.56□□□□□ -1.68
IFT140Q96RY7 RPL23AP48-201ENST00000406913 488 ntBASIC4.56□□□□□ -1.68
IFT140Q96RY7 OR51A3P-201ENST00000413596 924 ntBASIC4.56□□□□□ -1.68
IFT140Q96RY7 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
IFT140Q96RY7 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.56□□□□□ -1.68
IFT140Q96RY7 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
IFT140Q96RY7 RNA5SP320-201ENST00000516263 124 ntBASIC4.56□□□□□ -1.68
IFT140Q96RY7 SEC11B-201ENST00000518383 499 ntBASIC4.56□□□□□ -1.68
IFT140Q96RY7 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.56□□□□□ -1.68
IFT140Q96RY7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.56□□□□□ -1.68
IFT140Q96RY7 TRAV37-201ENST00000553906 342 ntBASIC4.56□□□□□ -1.68
IFT140Q96RY7 AL592295.2-201ENST00000612578 206 ntBASIC4.56□□□□□ -1.68
IFT140Q96RY7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.55□□□□□ -1.68
IFT140Q96RY7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
IFT140Q96RY7 HSPA8P1-201ENST00000425843 1833 ntBASIC4.55□□□□□ -1.68
IFT140Q96RY7 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC4.55□□□□□ -1.68
IFT140Q96RY7 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
IFT140Q96RY7 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
IFT140Q96RY7 Y_RNA.238-201ENST00000364441 102 ntBASIC4.55□□□□□ -1.68
IFT140Q96RY7 5S_rRNA.2-201ENST00000391293 112 ntBASIC4.55□□□□□ -1.68
IFT140Q96RY7 RPS3AP26-201ENST00000398259 784 ntBASIC4.55□□□□□ -1.68
IFT140Q96RY7 AL590103.1-201ENST00000434488 307 ntBASIC4.55□□□□□ -1.68
IFT140Q96RY7 AC010468.1-201ENST00000461022 817 ntBASIC4.55□□□□□ -1.68
IFT140Q96RY7 RPL9P32-201ENST00000464118 620 ntBASIC4.55□□□□□ -1.68
IFT140Q96RY7 GOLGA5P1-201ENST00000507317 980 ntBASIC4.55□□□□□ -1.68
IFT140Q96RY7 KLHL2P1-201ENST00000508691 521 ntBASIC4.55□□□□□ -1.68
IFT140Q96RY7 VWA8P1-201ENST00000510889 176 ntBASIC4.55□□□□□ -1.68
IFT140Q96RY7 AC019227.1-201ENST00000526902 510 ntBASIC4.55□□□□□ -1.68
IFT140Q96RY7 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.55□□□□□ -1.68
IFT140Q96RY7 AC025811.1-201ENST00000604312 472 ntBASIC4.55□□□□□ -1.68
IFT140Q96RY7 AC007621.1-201ENST00000604544 437 ntBASIC4.55□□□□□ -1.68
IFT140Q96RY7 AC006111.3-201ENST00000622137 383 ntBASIC4.55□□□□□ -1.68
IFT140Q96RY7 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.68
IFT140Q96RY7 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.55□□□□□ -1.68
IFT140Q96RY7 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.55□□□□□ -1.68
IFT140Q96RY7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
IFT140Q96RY7 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.54□□□□□ -1.68
IFT140Q96RY7 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
IFT140Q96RY7 RNA5SP274-201ENST00000410484 108 ntBASIC4.54□□□□□ -1.68
IFT140Q96RY7 RNU4-53P-201ENST00000410828 140 ntBASIC4.54□□□□□ -1.68
IFT140Q96RY7 RN7SKP58-201ENST00000411010 305 ntBASIC4.54□□□□□ -1.68
IFT140Q96RY7 AL135786.1-201ENST00000415892 214 ntBASIC4.54□□□□□ -1.68
IFT140Q96RY7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.54□□□□□ -1.68
IFT140Q96RY7 HMGN2P3-201ENST00000433603 273 ntBASIC4.54□□□□□ -1.68
IFT140Q96RY7 HMGN2P5-201ENST00000436882 273 ntBASIC4.54□□□□□ -1.68
IFT140Q96RY7 AC092013.1-201ENST00000438795 332 ntBASIC4.54□□□□□ -1.68
IFT140Q96RY7 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.54□□□□□ -1.68
IFT140Q96RY7 RN7SL330P-201ENST00000469709 307 ntBASIC4.54□□□□□ -1.68
IFT140Q96RY7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.54□□□□□ -1.68
IFT140Q96RY7 AC141257.3-201ENST00000572906 215 ntBASIC4.54□□□□□ -1.68
IFT140Q96RY7 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.54□□□□□ -1.68
IFT140Q96RY7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
IFT140Q96RY7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
IFT140Q96RY7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
IFT140Q96RY7 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
IFT140Q96RY7 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.53□□□□□ -1.68
IFT140Q96RY7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.53□□□□□ -1.68
IFT140Q96RY7 AL513043.1-201ENST00000439124 535 ntBASIC4.53□□□□□ -1.68
IFT140Q96RY7 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.53□□□□□ -1.68
IFT140Q96RY7 RPL7P12-201ENST00000446719 750 ntBASIC4.53□□□□□ -1.68
IFT140Q96RY7 AC078817.1-201ENST00000492623 435 ntBASIC4.53□□□□□ -1.68
IFT140Q96RY7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.53□□□□□ -1.68
IFT140Q96RY7 AC022069.1-201ENST00000582910 658 ntBASIC4.53□□□□□ -1.68
IFT140Q96RY7 AC099063.3-201ENST00000642066 185 ntBASIC4.53□□□□□ -1.68
IFT140Q96RY7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms