Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ITCHQ96J02 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
ITCHQ96J02 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.29□□□□□ -1.88
ITCHQ96J02 AC011978.2-201ENST00000569835 2054 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 AL157700.1-201ENST00000561973 1432 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.29□□□□□ -1.88
ITCHQ96J02 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ITCHQ96J02 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.29□□□□□ -1.88
ITCHQ96J02 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ITCHQ96J02 SNORA31-201ENST00000362607 130 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.29□□□□□ -1.88
ITCHQ96J02 SNORD65C-201ENST00000390962 71 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 RNA5SP31-201ENST00000411144 127 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 RNA5SP107-201ENST00000411358 122 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.29□□□□□ -1.88
ITCHQ96J02 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.29□□□□□ -1.88
ITCHQ96J02 RPS7P13-201ENST00000413955 498 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.29□□□□□ -1.88
ITCHQ96J02 AL389915.1-201ENST00000422463 466 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 GLRXP1-201ENST00000423261 334 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.29□□□□□ -1.88
ITCHQ96J02 DEFB130D-201ENST00000426866 237 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.29□□□□□ -1.88
ITCHQ96J02 HMGB1P45-201ENST00000435986 653 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 YWHAZP8-201ENST00000436935 731 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 AC005002.1-201ENST00000447458 540 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.29□□□□□ -1.88
ITCHQ96J02 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.29□□□□□ -1.88
ITCHQ96J02 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.29□□□□□ -1.88
ITCHQ96J02 HMGN1P18-201ENST00000457642 277 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 RPL23AP62-201ENST00000463396 453 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.29□□□□□ -1.88
ITCHQ96J02 RPS27P23-201ENST00000487608 251 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 UBE2CP3-201ENST00000502715 450 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 HMGN1P11-201ENST00000508668 303 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.29□□□□□ -1.88
ITCHQ96J02 HMGB1P1-201ENST00000522557 636 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 AC007991.1-201ENST00000522680 631 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.29□□□□□ -1.88
ITCHQ96J02 OR6C73P-201ENST00000546432 358 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 HSPE1P5-201ENST00000561489 272 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 AC093227.2-201ENST00000589357 285 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.29□□□□□ -1.88
ITCHQ96J02 AP005229.2-201ENST00000609980 697 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.29□□□□□ -1.88
ITCHQ96J02 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.29□□□□□ -1.88
ITCHQ96J02 AL356118.1-201ENST00000635272 1078 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
ITCHQ96J02 AC017071.1-201ENST00000564407 2204 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ITCHQ96J02 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ITCHQ96J02 ZNF849P-201ENST00000594711 1566 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 AC032011.1-201ENST00000611703 1549 ntBASIC3.29□□□□□ -1.88
ITCHQ96J02 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.28□□□□□ -1.88
ITCHQ96J02 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.28□□□□□ -1.88
ITCHQ96J02 AC090337.1-201ENST00000579651 2074 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ITCHQ96J02 AC107081.3-201ENST00000612715 2034 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
ITCHQ96J02 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
ITCHQ96J02 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
ITCHQ96J02 SNORD9-201ENST00000362566 104 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 RNA5SP189-201ENST00000364920 115 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 RNU6-354P-201ENST00000383862 107 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 RNU6-610P-201ENST00000384264 107 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.28□□□□□ -1.88
ITCHQ96J02 AC126124.2-201ENST00000413542 321 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.28□□□□□ -1.88
ITCHQ96J02 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.28□□□□□ -1.88
ITCHQ96J02 OR51AB1P-201ENST00000429046 620 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 PSMA2P3-201ENST00000429685 675 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 AL513175.1-201ENST00000431492 780 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 RPS29P7-201ENST00000439662 171 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.28□□□□□ -1.88
ITCHQ96J02 GXYLT1P1-201ENST00000446657 490 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 AC008264.1-201ENST00000447612 367 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.28□□□□□ -1.88
ITCHQ96J02 AC097262.1-201ENST00000452559 548 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.28□□□□□ -1.88
ITCHQ96J02 SNORA84-201ENST00000459229 133 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 AC034236.1-201ENST00000469891 373 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
ITCHQ96J02 IGJP1-201ENST00000522682 475 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.28□□□□□ -1.88
ITCHQ96J02 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.28□□□□□ -1.88
ITCHQ96J02 AC124293.1-201ENST00000530034 493 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.28□□□□□ -1.88
ITCHQ96J02 AC034105.4-201ENST00000568304 277 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.28□□□□□ -1.88
ITCHQ96J02 MIR3186-201ENST00000577404 85 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 MIR5047-201ENST00000579212 100 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.28□□□□□ -1.88
ITCHQ96J02 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.28□□□□□ -1.88
ITCHQ96J02 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.28□□□□□ -1.88
ITCHQ96J02 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.28□□□□□ -1.88
ITCHQ96J02 AC022146.1-201ENST00000595307 847 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 AC018754.1-201ENST00000607486 925 ntBASIC3.28□□□□□ -1.88
ITCHQ96J02 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
ITCHQ96J02 U4.6-201ENST00000621618 127 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms