Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 AC005921.1-201ENST00000510589 286 ntBASIC3.33□□□□□ -1.88
UBE2E3Q969T4 AC104619.4-201ENST00000510773 249 ntBASIC3.33□□□□□ -1.88
UBE2E3Q969T4 AC023141.12-201ENST00000512399 199 ntBASIC3.33□□□□□ -1.88
UBE2E3Q969T4 AC104057.1-201ENST00000515547 497 ntBASIC3.33□□□□□ -1.88
UBE2E3Q969T4 SNORA26.10-201ENST00000516427 141 ntBASIC3.33□□□□□ -1.88
UBE2E3Q969T4 SNORA70.18-201ENST00000516696 98 ntBASIC3.33□□□□□ -1.88
UBE2E3Q969T4 IGKV2D-36-201ENST00000518643 226 ntBASIC3.33□□□□□ -1.88
UBE2E3Q969T4 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.33□□□□□ -1.88
UBE2E3Q969T4 MTCO1P49-201ENST00000523429 802 ntBASIC3.33□□□□□ -1.88
UBE2E3Q969T4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.33□□□□□ -1.88
UBE2E3Q969T4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.33□□□□□ -1.88
UBE2E3Q969T4 OR8K4P-201ENST00000534608 872 ntBASIC3.33□□□□□ -1.88
UBE2E3Q969T4 RFPL1S-203ENST00000539579 330 ntBASIC3.33□□□□□ -1.88
UBE2E3Q969T4 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.33□□□□□ -1.88
UBE2E3Q969T4 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.33□□□□□ -1.88
UBE2E3Q969T4 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.33□□□□□ -1.88
UBE2E3Q969T4 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.33□□□□□ -1.88
UBE2E3Q969T4 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.33□□□□□ -1.88
UBE2E3Q969T4 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.33□□□□□ -1.88
UBE2E3Q969T4 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.33□□□□□ -1.88
UBE2E3Q969T4 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.33□□□□□ -1.88
UBE2E3Q969T4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.33□□□□□ -1.88
UBE2E3Q969T4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.33□□□□□ -1.88
UBE2E3Q969T4 AC009093.8-201ENST00000641769 292 ntBASIC3.33□□□□□ -1.88
UBE2E3Q969T4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
UBE2E3Q969T4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
UBE2E3Q969T4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
UBE2E3Q969T4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
UBE2E3Q969T4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
UBE2E3Q969T4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
UBE2E3Q969T4 MFSD8-236ENST00000641509 4050 ntBASIC3.33□□□□□ -1.88
UBE2E3Q969T4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.33□□□□□ -1.88
UBE2E3Q969T4 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.33□□□□□ -1.88
UBE2E3Q969T4 AL513302.2-201ENST00000562313 1842 ntBASIC3.33□□□□□ -1.88
UBE2E3Q969T4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
UBE2E3Q969T4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
UBE2E3Q969T4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.32□□□□□ -1.88
UBE2E3Q969T4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.32□□□□□ -1.88
UBE2E3Q969T4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.32□□□□□ -1.88
UBE2E3Q969T4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
UBE2E3Q969T4 RNU1-85P-201ENST00000364127 164 ntBASIC3.32□□□□□ -1.88
UBE2E3Q969T4 RNU6-55P-201ENST00000411092 107 ntBASIC3.32□□□□□ -1.88
UBE2E3Q969T4 RNU6-954P-201ENST00000411355 107 ntBASIC3.32□□□□□ -1.88
UBE2E3Q969T4 RAB9AP3-201ENST00000412737 573 ntBASIC3.32□□□□□ -1.88
UBE2E3Q969T4 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.32□□□□□ -1.88
UBE2E3Q969T4 RPL36AP36-201ENST00000418616 301 ntBASIC3.32□□□□□ -1.88
UBE2E3Q969T4 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.32□□□□□ -1.88
UBE2E3Q969T4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.32□□□□□ -1.88
UBE2E3Q969T4 AC092641.1-201ENST00000440229 772 ntBASIC3.32□□□□□ -1.88
UBE2E3Q969T4 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.32□□□□□ -1.88
UBE2E3Q969T4 AC008264.1-201ENST00000447612 367 ntBASIC3.32□□□□□ -1.88
UBE2E3Q969T4 AL359073.1-201ENST00000448036 403 ntBASIC3.32□□□□□ -1.88
UBE2E3Q969T4 RAB9AP1-201ENST00000449393 573 ntBASIC3.32□□□□□ -1.88
UBE2E3Q969T4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.32□□□□□ -1.88
UBE2E3Q969T4 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.32□□□□□ -1.88
UBE2E3Q969T4 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
UBE2E3Q969T4 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.32□□□□□ -1.88
UBE2E3Q969T4 AC119751.1-201ENST00000513357 765 ntBASIC3.32□□□□□ -1.88
UBE2E3Q969T4 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
UBE2E3Q969T4 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.32□□□□□ -1.88
UBE2E3Q969T4 CR383656.14-201ENST00000551951 406 ntBASIC3.32□□□□□ -1.88
UBE2E3Q969T4 AC007687.1-201ENST00000602704 304 ntBASIC3.32□□□□□ -1.88
UBE2E3Q969T4 AC009948.4-201ENST00000604692 675 ntBASIC3.32□□□□□ -1.88
UBE2E3Q969T4 AL592295.2-201ENST00000612578 206 ntBASIC3.32□□□□□ -1.88
UBE2E3Q969T4 CR392039.5-201ENST00000623201 510 ntBASIC3.32□□□□□ -1.88
UBE2E3Q969T4 MTND4P10-201ENST00000446199 1363 ntBASIC3.32□□□□□ -1.88
UBE2E3Q969T4 SGO1P1-201ENST00000603525 1447 ntBASIC3.32□□□□□ -1.88
UBE2E3Q969T4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.32□□□□□ -1.88
UBE2E3Q969T4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
UBE2E3Q969T4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.32□□□□□ -1.88
UBE2E3Q969T4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.32□□□□□ -1.88
UBE2E3Q969T4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
UBE2E3Q969T4 AC008725.1-201ENST00000605123 2263 ntBASIC3.31□□□□□ -1.88
UBE2E3Q969T4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
UBE2E3Q969T4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBE2E3Q969T4 AC095050.2-201ENST00000510748 1458 ntBASIC3.31□□□□□ -1.88
UBE2E3Q969T4 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.31□□□□□ -1.88
UBE2E3Q969T4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBE2E3Q969T4 MTND5P31-201ENST00000419366 1374 ntBASIC3.31□□□□□ -1.88
UBE2E3Q969T4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBE2E3Q969T4 SNORA31-201ENST00000362607 130 ntBASIC3.31□□□□□ -1.88
UBE2E3Q969T4 MIR218-2-201ENST00000385006 110 ntBASIC3.31□□□□□ -1.88
UBE2E3Q969T4 MIR16-1-201ENST00000385271 89 ntBASIC3.31□□□□□ -1.88
UBE2E3Q969T4 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.31□□□□□ -1.88
UBE2E3Q969T4 RN7SKP285-201ENST00000410137 318 ntBASIC3.31□□□□□ -1.88
UBE2E3Q969T4 AC019070.1-201ENST00000415008 1024 ntBASIC3.31□□□□□ -1.88
UBE2E3Q969T4 DBIP2-201ENST00000419076 262 ntBASIC3.31□□□□□ -1.88
UBE2E3Q969T4 AC096632.1-201ENST00000427395 310 ntBASIC3.31□□□□□ -1.88
UBE2E3Q969T4 AC114973.1-201ENST00000429057 632 ntBASIC3.31□□□□□ -1.88
UBE2E3Q969T4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.31□□□□□ -1.88
UBE2E3Q969T4 AL050341.1-201ENST00000447743 313 ntBASIC3.31□□□□□ -1.88
UBE2E3Q969T4 AC097262.1-201ENST00000452559 548 ntBASIC3.31□□□□□ -1.88
UBE2E3Q969T4 RNU7-140P-201ENST00000459546 60 ntBASIC3.31□□□□□ -1.88
UBE2E3Q969T4 AC092451.1-201ENST00000480211 153 ntBASIC3.31□□□□□ -1.88
UBE2E3Q969T4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.31□□□□□ -1.88
UBE2E3Q969T4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
UBE2E3Q969T4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
UBE2E3Q969T4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.31□□□□□ -1.88
UBE2E3Q969T4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
UBE2E3Q969T4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 156.4 ms