Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.53□□□□□ -1.36
HLA-CQ95604 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
HLA-CQ95604 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
HLA-CQ95604 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
HLA-CQ95604 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-CQ95604 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-CQ95604 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-CQ95604 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.53□□□□□ -1.36
HLA-CQ95604 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-CQ95604 Y_RNA.214-201ENST00000364201 112 ntBASIC6.53□□□□□ -1.36
HLA-CQ95604 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
HLA-CQ95604 RNU6-746P-201ENST00000384112 109 ntBASIC6.53□□□□□ -1.36
HLA-CQ95604 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
HLA-CQ95604 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.53□□□□□ -1.36
HLA-CQ95604 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.53□□□□□ -1.36
HLA-CQ95604 AC092017.2-201ENST00000427600 362 ntBASIC6.53□□□□□ -1.36
HLA-CQ95604 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-CQ95604 AC104332.1-201ENST00000440471 797 ntBASIC6.53□□□□□ -1.36
HLA-CQ95604 FCF1P4-201ENST00000448326 183 ntBASIC6.53□□□□□ -1.36
HLA-CQ95604 AC087884.1-201ENST00000469738 328 ntBASIC6.53□□□□□ -1.36
HLA-CQ95604 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
HLA-CQ95604 AC135721.1-201ENST00000497954 479 ntBASIC6.53□□□□□ -1.36
HLA-CQ95604 AC006499.3-201ENST00000506077 748 ntBASIC6.53□□□□□ -1.36
HLA-CQ95604 AC092470.1-201ENST00000546187 132 ntBASIC6.53□□□□□ -1.36
HLA-CQ95604 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.53□□□□□ -1.36
HLA-CQ95604 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.53□□□□□ -1.36
HLA-CQ95604 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC6.53□□□□□ -1.36
HLA-CQ95604 MIR4776-2-201ENST00000580204 80 ntBASIC6.53□□□□□ -1.36
HLA-CQ95604 MIR5188-201ENST00000583467 113 ntBASIC6.53□□□□□ -1.36
HLA-CQ95604 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.53□□□□□ -1.36
HLA-CQ95604 AC024940.4-201ENST00000605507 246 ntBASIC6.53□□□□□ -1.36
HLA-CQ95604 MIR8089-201ENST00000620165 82 ntBASIC6.53□□□□□ -1.36
HLA-CQ95604 AP001784.1-201ENST00000624107 428 ntBASIC6.53□□□□□ -1.36
HLA-CQ95604 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.53□□□□□ -1.36
HLA-CQ95604 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC6.53□□□□□ -1.36
HLA-CQ95604 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.53□□□□□ -1.36
HLA-CQ95604 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
HLA-CQ95604 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-CQ95604 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-CQ95604 AL589993.1-201ENST00000407450 2524 ntBASIC6.53□□□□□ -1.36
HLA-CQ95604 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-CQ95604 AC104162.1-201ENST00000430831 2382 ntBASIC6.53□□□□□ -1.36
HLA-CQ95604 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
HLA-CQ95604 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.53□□□□□ -1.36
HLA-CQ95604 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
HLA-CQ95604 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.53□□□□□ -1.36
HLA-CQ95604 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.53□□□□□ -1.36
HLA-CQ95604 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-CQ95604 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.53□□□□□ -1.36
HLA-CQ95604 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.53□□□□□ -1.36
HLA-CQ95604 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.52□□□□□ -1.37
HLA-CQ95604 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.52□□□□□ -1.37
HLA-CQ95604 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-CQ95604 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-CQ95604 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.52□□□□□ -1.37
HLA-CQ95604 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-CQ95604 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-CQ95604 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.52□□□□□ -1.37
HLA-CQ95604 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.52□□□□□ -1.37
HLA-CQ95604 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-CQ95604 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-CQ95604 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
HLA-CQ95604 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-CQ95604 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HLA-CQ95604 Y_RNA.20-201ENST00000362479 113 ntBASIC6.52□□□□□ -1.37
HLA-CQ95604 Y_RNA.222-201ENST00000364264 102 ntBASIC6.52□□□□□ -1.37
HLA-CQ95604 RNU6-946P-201ENST00000383878 107 ntBASIC6.52□□□□□ -1.37
HLA-CQ95604 RNU6-306P-201ENST00000384617 107 ntBASIC6.52□□□□□ -1.37
HLA-CQ95604 RPL37P18-201ENST00000411602 243 ntBASIC6.52□□□□□ -1.37
HLA-CQ95604 AC108032.1-201ENST00000416706 207 ntBASIC6.52□□□□□ -1.37
HLA-CQ95604 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.52□□□□□ -1.37
HLA-CQ95604 AL360081.1-201ENST00000428299 555 ntBASIC6.52□□□□□ -1.37
HLA-CQ95604 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.52□□□□□ -1.37
HLA-CQ95604 RPL17P19-201ENST00000489069 552 ntBASIC6.52□□□□□ -1.37
HLA-CQ95604 AC083829.1-201ENST00000503756 657 ntBASIC6.52□□□□□ -1.37
HLA-CQ95604 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.52□□□□□ -1.37
HLA-CQ95604 SNORA81.3-201ENST00000517283 198 ntBASIC6.52□□□□□ -1.37
HLA-CQ95604 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.52□□□□□ -1.37
HLA-CQ95604 AC022080.3-201ENST00000544433 482 ntBASIC6.52□□□□□ -1.37
HLA-CQ95604 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC6.52□□□□□ -1.37
HLA-CQ95604 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.52□□□□□ -1.37
HLA-CQ95604 MRPS21P9-201ENST00000571150 257 ntBASIC6.52□□□□□ -1.37
HLA-CQ95604 SNORA70D-201ENST00000578836 135 ntBASIC6.52□□□□□ -1.37
HLA-CQ95604 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC6.52□□□□□ -1.37
HLA-CQ95604 AL031176.1-201ENST00000604554 466 ntBASIC6.52□□□□□ -1.37
HLA-CQ95604 AL670379.4-201ENST00000605279 254 ntBASIC6.52□□□□□ -1.37
HLA-CQ95604 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-CQ95604 SDR42E1P2-201ENST00000614861 481 ntBASIC6.52□□□□□ -1.37
HLA-CQ95604 SNHG22-203ENST00000617833 660 ntBASIC6.52□□□□□ -1.37
HLA-CQ95604 SDR42E1P4-201ENST00000620894 481 ntBASIC6.52□□□□□ -1.37
HLA-CQ95604 MRPL57P1-201ENST00000621486 265 ntBASIC6.52□□□□□ -1.37
HLA-CQ95604 AL450226.2-201ENST00000622913 439 ntBASIC6.52□□□□□ -1.37
HLA-CQ95604 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.52□□□□□ -1.37
HLA-CQ95604 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-CQ95604 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
HLA-CQ95604 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-CQ95604 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.52□□□□□ -1.37
HLA-CQ95604 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
HLA-CQ95604 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC6.52□□□□□ -1.37
HLA-CQ95604 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms