Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 AL445669.2-201ENST00000454425 421 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 AC116533.1-201ENST00000459748 321 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PTP4A1Q93096 OR4G11P-201ENST00000492842 939 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 RPL31P61-201ENST00000496160 376 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 AC113347.3-201ENST00000509113 148 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 MTCYBP16-201ENST00000509187 1129 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 RNA5SP49-201ENST00000516450 115 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 RNU6-1231P-201ENST00000517185 103 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 AC009643.1-201ENST00000532030 391 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 RPL23AP87-202ENST00000573039 466 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 MIR4277-201ENST00000578298 84 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 MIR4284-201ENST00000578924 81 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PTP4A1Q93096 AL022067.1-201ENST00000602426 454 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 AC008745.1-201ENST00000604064 271 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 AC021749.1-201ENST00000604322 607 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 AC024060.1-201ENST00000607052 494 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 FAM27D1-201ENST00000612308 341 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 AL355810.1-201ENST00000614629 552 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 XIST_intron.1-201ENST00000619444 68 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 MIR7641-1-201ENST00000627518 61 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 AL773545.4-201ENST00000637262 310 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 U6.101-201ENST00000637707 76 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 AL513478.4-201ENST00000641636 310 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PTP4A1Q93096 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PTP4A1Q93096 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PTP4A1Q93096 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PTP4A1Q93096 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PTP4A1Q93096 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
PTP4A1Q93096 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.7□□□□□ -1.82
PTP4A1Q93096 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PTP4A1Q93096 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PTP4A1Q93096 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.7□□□□□ -1.82
PTP4A1Q93096 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PTP4A1Q93096 RNU6-216P-201ENST00000363282 104 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PTP4A1Q93096 MIR591-201ENST00000385290 95 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 U3.22-201ENST00000391120 215 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 PGBD4P8-201ENST00000412993 562 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.7□□□□□ -1.82
PTP4A1Q93096 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.7□□□□□ -1.82
PTP4A1Q93096 OR4K6P-201ENST00000416478 897 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 AL137014.1-201ENST00000420490 1226 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.7□□□□□ -1.82
PTP4A1Q93096 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.7□□□□□ -1.82
PTP4A1Q93096 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.7□□□□□ -1.82
PTP4A1Q93096 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.7□□□□□ -1.82
PTP4A1Q93096 Z95327.1-201ENST00000446082 482 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 RPL23AP31-201ENST00000456160 467 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PTP4A1Q93096 AC011276.1-201ENST00000469688 323 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 RPS23P3-201ENST00000470993 430 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 AC093278.1-201ENST00000494700 600 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 AC096751.1-202ENST00000502691 1067 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 RNA5SP519-201ENST00000516480 119 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.7□□□□□ -1.82
PTP4A1Q93096 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.7□□□□□ -1.82
PTP4A1Q93096 SNRPGP16-201ENST00000533275 226 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 AL391156.1-201ENST00000554965 554 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.7□□□□□ -1.82
PTP4A1Q93096 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.7□□□□□ -1.82
PTP4A1Q93096 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.7□□□□□ -1.82
PTP4A1Q93096 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.7□□□□□ -1.82
PTP4A1Q93096 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.7□□□□□ -1.82
PTP4A1Q93096 AC068790.4-201ENST00000602474 263 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 AC104662.1-201ENST00000604448 511 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 AC009237.15-201ENST00000610252 501 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 AC024257.5-201ENST00000612739 531 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.7□□□□□ -1.82
PTP4A1Q93096 AC123767.1-202ENST00000620407 817 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 AC095031.1-201ENST00000623685 672 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.7□□□□□ -1.82
PTP4A1Q93096 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.7□□□□□ -1.82
PTP4A1Q93096 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 AP002001.2-201ENST00000529025 1469 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 SGO1P2-201ENST00000429458 1589 ntBASIC3.7□□□□□ -1.82
PTP4A1Q93096 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms