Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 TMEM183AP1-205ENST00000432739 290 ntBASIC9.36□□□□□ -0.91
TRIM41Q8WV44 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC9.36□□□□□ -0.91
TRIM41Q8WV44 AL359073.1-201ENST00000448036 403 ntBASIC9.36□□□□□ -0.91
TRIM41Q8WV44 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC9.36□□□□□ -0.91
TRIM41Q8WV44 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC9.36□□□□□ -0.91
TRIM41Q8WV44 PPIAP21-201ENST00000464473 501 ntBASIC9.36□□□□□ -0.91
TRIM41Q8WV44 AC006512.1-201ENST00000468816 291 ntBASIC9.36□□□□□ -0.91
TRIM41Q8WV44 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC9.36□□□□□ -0.91
TRIM41Q8WV44 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC9.36□□□□□ -0.91
TRIM41Q8WV44 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC9.36□□□□□ -0.91
TRIM41Q8WV44 PMS2P3-207ENST00000529061 717 ntBASIC9.36□□□□□ -0.91
TRIM41Q8WV44 NCAPGP2-201ENST00000557911 754 ntBASIC9.36□□□□□ -0.91
TRIM41Q8WV44 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC9.36□□□□□ -0.91
TRIM41Q8WV44 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC9.36□□□□□ -0.91
TRIM41Q8WV44 AC092807.2-201ENST00000609367 243 ntBASIC9.36□□□□□ -0.91
TRIM41Q8WV44 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC9.36□□□□□ -0.91
TRIM41Q8WV44 AC005899.7-201ENST00000618199 588 ntBASIC9.36□□□□□ -0.91
TRIM41Q8WV44 AC022106.2-201ENST00000620114 757 ntBASIC9.36□□□□□ -0.91
TRIM41Q8WV44 AC145207.9-201ENST00000623802 325 ntBASIC9.36□□□□□ -0.91
TRIM41Q8WV44 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
TRIM41Q8WV44 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC9.36□□□□□ -0.91
TRIM41Q8WV44 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TRIM41Q8WV44 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC9.36□□□□□ -0.91
TRIM41Q8WV44 AC093311.1-201ENST00000506586 2021 ntBASIC9.36□□□□□ -0.91
TRIM41Q8WV44 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TRIM41Q8WV44 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 RNU6-108P-201ENST00000365558 107 ntBASIC9.35□□□□□ -0.91
TRIM41Q8WV44 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 MT-TG-201ENST00000387429 68 ntBASIC9.35□□□□□ -0.91
TRIM41Q8WV44 RNU4-26P-201ENST00000410270 107 ntBASIC9.35□□□□□ -0.91
TRIM41Q8WV44 RNU2-50P-201ENST00000410494 143 ntBASIC9.35□□□□□ -0.91
TRIM41Q8WV44 GPS2P1-201ENST00000411761 986 ntBASIC9.35□□□□□ -0.91
TRIM41Q8WV44 AC127526.1-201ENST00000417526 366 ntBASIC9.35□□□□□ -0.91
TRIM41Q8WV44 AL034379.1-201ENST00000423216 253 ntBASIC9.35□□□□□ -0.91
TRIM41Q8WV44 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 MTND3P16-201ENST00000452205 344 ntBASIC9.35□□□□□ -0.91
TRIM41Q8WV44 RPL7P22-201ENST00000466005 733 ntBASIC9.35□□□□□ -0.91
TRIM41Q8WV44 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 AC020593.1-201ENST00000507399 299 ntBASIC9.35□□□□□ -0.91
TRIM41Q8WV44 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 SMURF2P1-201ENST00000514992 481 ntBASIC9.35□□□□□ -0.91
TRIM41Q8WV44 RN7SKP283-201ENST00000517197 270 ntBASIC9.35□□□□□ -0.91
TRIM41Q8WV44 NARSP2-201ENST00000518524 679 ntBASIC9.35□□□□□ -0.91
TRIM41Q8WV44 AC022616.3-201ENST00000523940 148 ntBASIC9.35□□□□□ -0.91
TRIM41Q8WV44 COPS8P3-201ENST00000526024 482 ntBASIC9.35□□□□□ -0.91
TRIM41Q8WV44 AC009643.1-201ENST00000532030 391 ntBASIC9.35□□□□□ -0.91
TRIM41Q8WV44 AC092490.3-201ENST00000545370 572 ntBASIC9.35□□□□□ -0.91
TRIM41Q8WV44 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 AC106785.1-201ENST00000565935 262 ntBASIC9.35□□□□□ -0.91
TRIM41Q8WV44 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 SNORD39.2-201ENST00000579995 76 ntBASIC9.35□□□□□ -0.91
TRIM41Q8WV44 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 CYP2C61P-201ENST00000604072 290 ntBASIC9.35□□□□□ -0.91
TRIM41Q8WV44 AP000654.2-201ENST00000605633 586 ntBASIC9.35□□□□□ -0.91
TRIM41Q8WV44 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
TRIM41Q8WV44 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TRIM41Q8WV44 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
TRIM41Q8WV44 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TRIM41Q8WV44 OR1S2-201ENST00000302592 978 ntBASIC9.34□□□□□ -0.91
TRIM41Q8WV44 RNU6-1097P-201ENST00000363586 107 ntBASIC9.34□□□□□ -0.91
TRIM41Q8WV44 RNU6-169P-201ENST00000365336 107 ntBASIC9.34□□□□□ -0.91
TRIM41Q8WV44 RNU1-64P-201ENST00000365443 163 ntBASIC9.34□□□□□ -0.91
TRIM41Q8WV44 Y_RNA.373-201ENST00000365600 103 ntBASIC9.34□□□□□ -0.91
TRIM41Q8WV44 MIR670-201ENST00000390142 98 ntBASIC9.34□□□□□ -0.91
TRIM41Q8WV44 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC9.34□□□□□ -0.91
TRIM41Q8WV44 RPSAP35-201ENST00000413753 818 ntBASIC9.34□□□□□ -0.91
TRIM41Q8WV44 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC9.34□□□□□ -0.91
TRIM41Q8WV44 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC9.34□□□□□ -0.91
TRIM41Q8WV44 ERLEC1P1-201ENST00000433806 578 ntBASIC9.34□□□□□ -0.91
TRIM41Q8WV44 HMGB3P10-201ENST00000434734 572 ntBASIC9.34□□□□□ -0.91
TRIM41Q8WV44 RPL23AP83-201ENST00000434984 473 ntBASIC9.34□□□□□ -0.91
TRIM41Q8WV44 FAM103A2P-201ENST00000444122 354 ntBASIC9.34□□□□□ -0.91
TRIM41Q8WV44 AC239798.3-201ENST00000454459 408 ntBASIC9.34□□□□□ -0.91
TRIM41Q8WV44 RPS20P32-201ENST00000456044 356 ntBASIC9.34□□□□□ -0.91
TRIM41Q8WV44 AL163973.1-201ENST00000484753 577 ntBASIC9.34□□□□□ -0.91
TRIM41Q8WV44 MTCO1P29-201ENST00000496868 288 ntBASIC9.34□□□□□ -0.91
TRIM41Q8WV44 AC104136.1-201ENST00000512969 394 ntBASIC9.34□□□□□ -0.91
TRIM41Q8WV44 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC9.34□□□□□ -0.91
TRIM41Q8WV44 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC9.34□□□□□ -0.91
TRIM41Q8WV44 MAGOH2P-202ENST00000584384 429 ntBASIC9.34□□□□□ -0.91
TRIM41Q8WV44 AC007938.3-201ENST00000604965 623 ntBASIC9.34□□□□□ -0.91
TRIM41Q8WV44 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms