Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC020923.1-201ENST00000624021 917 ntBASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 AC010733.2-201ENST00000589496 5702 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 AC058791.1-201ENST00000608412 3198 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 AL122126.1-201ENST00000546905 1318 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 FAM35CP-201ENST00000554755 2470 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 RPS3AP26-201ENST00000398259 784 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 RSL24D1P1-201ENST00000404972 493 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 MRPL50P2-201ENST00000416821 482 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 FAR1P1-201ENST00000427163 934 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 FO393419.3-201ENST00000428741 282 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 ATP5JP1-201ENST00000431631 322 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 AL353705.1-201ENST00000433468 480 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 AL035246.1-201ENST00000433554 1255 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 RPL36AP33-201ENST00000450395 310 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 HMGN1P18-201ENST00000457642 277 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 SNORD105B-201ENST00000458770 79 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 RPS27P29-201ENST00000463110 252 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 AC010285.1-201ENST00000470580 392 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 AC107294.3-201ENST00000609211 526 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 VIS1.1-201ENST00000610517 203 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 AC110801.1-201ENST00000623590 212 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 MTND5P28-201ENST00000438005 1594 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 AL365440.1-201ENST00000436135 2167 ntBASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CLHC1Q8NHS4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 MFSD8-233ENST00000641482 4860 ntBASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 RNU6-1243P-201ENST00000364028 107 ntBASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 SNORA5A-201ENST00000384111 134 ntBASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 RNU6-837P-201ENST00000391056 108 ntBASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 AL035458.1-201ENST00000433096 585 ntBASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 RRM2P4-201ENST00000441721 562 ntBASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 AC087312.1-201ENST00000471411 480 ntBASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 AC021205.2-201ENST00000480069 347 ntBASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 AC005726.1-201ENST00000494679 427 ntBASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 RNU1-95P-201ENST00000516357 160 ntBASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 RNU1-128P-201ENST00000516704 160 ntBASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 AC019227.1-201ENST00000526902 510 ntBASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 AC037471.2-201ENST00000564941 598 ntBASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 MTCO3P22-201ENST00000603219 784 ntBASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 AC034229.5-201ENST00000624258 185 ntBASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLHC1Q8NHS4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 AC004972.1-201ENST00000623934 2209 ntBASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 RNU4-35P-201ENST00000362588 141 ntBASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 RN7SKP159-201ENST00000410657 292 ntBASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 RPS7P13-201ENST00000413955 498 ntBASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 CYCSP4-201ENST00000429682 331 ntBASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 MTCO1P57-201ENST00000432182 261 ntBASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 AC073063.1-201ENST00000434352 607 ntBASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 MRPS33P4-201ENST00000434892 317 ntBASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 AC068724.1-201ENST00000487100 792 ntBASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 HMGB1P23-201ENST00000518743 568 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms