Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AC107982.3-201ENST00000584957 985 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 NF1P5-201ENST00000588287 448 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AC096577.2-201ENST00000611455 153 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AC100793.4-201ENST00000613683 429 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AC015540.1-201ENST00000615828 501 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AC123768.4-201ENST00000616244 701 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AL138721.1-201ENST00000616756 179 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AC012314.7-201ENST00000619693 93 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AL356596.1-201ENST00000624230 379 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AC004817.4-201ENST00000602396 3625 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SMC1BQ8NDV3 MAPK10-349ENST00000641767 3661 ntBASIC5.46□□□□□ -1.53
SMC1BQ8NDV3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SMC1BQ8NDV3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SMC1BQ8NDV3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 PABPC1P9-201ENST00000426076 1612 ntBASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 RNU6-657P-201ENST00000383904 107 ntBASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 SNRPEP2-201ENST00000397592 279 ntBASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 DSTNP4-201ENST00000399472 474 ntBASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 AC007899.1-201ENST00000412776 775 ntBASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 AC009302.1-201ENST00000417147 390 ntBASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 IPMKP1-201ENST00000425988 855 ntBASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 AL591623.2-201ENST00000449978 222 ntBASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 SUMO2P2-201ENST00000456482 255 ntBASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 RNA5SP103-201ENST00000459503 118 ntBASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 AC097493.1-201ENST00000463958 372 ntBASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 AP000942.1-201ENST00000463969 747 ntBASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 AC016559.2-201ENST00000510759 359 ntBASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 AC022880.1-201ENST00000534017 973 ntBASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 AC012414.6-201ENST00000568241 401 ntBASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 AC136618.2-201ENST00000575091 400 ntBASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 AC112230.1-201ENST00000604342 547 ntBASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 AL034370.1-201ENST00000397254 1590 ntBASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.46□□□□□ -1.54
SMC1BQ8NDV3 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 AL445437.1-201ENST00000623157 3087 ntBASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 NDUFB4P4-201ENST00000404822 243 ntBASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 COX5BP7-201ENST00000414780 274 ntBASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 CDK8P2-201ENST00000415020 547 ntBASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 AL451139.1-201ENST00000434718 346 ntBASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 YWHAZP8-201ENST00000436935 731 ntBASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 LARP1BP3-201ENST00000437229 869 ntBASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 DNAJC19P1-201ENST00000455312 319 ntBASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 AC092757.1-201ENST00000467293 467 ntBASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 MYL12BP2-201ENST00000503948 512 ntBASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 RNU6-709P-201ENST00000517257 104 ntBASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 AP000790.1-201ENST00000528891 737 ntBASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 GTF2IP22-201ENST00000554443 182 ntBASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 SNORD39.3-201ENST00000584451 71 ntBASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 AC004492.1-201ENST00000607036 742 ntBASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 AC107214.2-201ENST00000608204 634 ntBASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 AC099842.1-201ENST00000619919 596 ntBASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms