Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC073073.1-201ENST00000493920 463 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AC108941.1-201ENST00000502853 530 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AC117522.1-201ENST00000509821 380 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 PARP4P3-201ENST00000510265 317 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AP001189.2-201ENST00000527320 189 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AP001646.1-201ENST00000527936 915 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AP002748.2-201ENST00000528671 348 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AC004217.3-201ENST00000551552 878 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AC091489.2-201ENST00000566263 604 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 MIR4429-201ENST00000580105 73 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AC245389.1-201ENST00000605141 529 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AC069304.2-201ENST00000605154 435 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AC091834.1-201ENST00000614543 472 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AC234782.5-201ENST00000617723 324 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AC092650.2-201ENST00000619984 902 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 CDR1-202ENST00000625883 1485 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AC017104.4-201ENST00000636283 1592 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 DBF4P1-201ENST00000412976 1892 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AC046144.1-201ENST00000478559 1853 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 RNU6-1066P-201ENST00000363573 105 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 RNU5A-6P-201ENST00000384136 116 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 RNU1-13P-201ENST00000384499 162 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 FGF7P8-201ENST00000402994 292 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 RNA5SP317-201ENST00000410176 116 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 RNA5SP311-201ENST00000411290 116 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 OFD1P18Y-201ENST00000420889 959 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 AC062016.2-201ENST00000420950 676 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 MTND3P23-201ENST00000431980 347 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 HMGB3P10-201ENST00000434734 572 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 TDGF1P1-201ENST00000445734 527 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 RPL18AP17-201ENST00000455326 198 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 AC146507.1-201ENST00000468335 354 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 AC022034.3-201ENST00000471393 478 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 AC025164.1-201ENST00000496249 478 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 AC011352.3-201ENST00000505162 593 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 MTCYBP43-201ENST00000513621 740 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 RNA5SP315-201ENST00000516340 116 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 RNA5SP312-201ENST00000517068 116 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 RNU6-1261P-201ENST00000517194 104 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 SLC2A13P1-201ENST00000531560 322 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 OR8R1P-201ENST00000543943 764 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 FKBP1BP1-201ENST00000553366 325 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 AC022916.3-201ENST00000592961 742 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 AL591034.3-201ENST00000605511 685 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 MIR7973-1-201ENST00000614683 76 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 AC243756.2-201ENST00000618406 463 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 AC018926.3-201ENST00000618841 406 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 AC120349.2-201ENST00000625002 298 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 MIR3688-2-201ENST00000636963 87 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 MIR492-201ENST00000638676 116 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 ZNF37BP-203ENST00000452306 1352 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 MTND4P29-201ENST00000503122 1372 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 AC090017.1-201ENST00000548612 1779 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 AC093775.1-201ENST00000624154 1868 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 AC097461.1-201ENST00000568928 2821 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 LINC00561-201ENST00000565815 2738 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 AL606537.1-201ENST00000607258 2011 ntBASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SLC44A3Q8N4M1 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms