Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE4Q8N205 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SYNE4Q8N205 AC032011.1-201ENST00000611703 1549 ntBASIC5.21□□□□□ -1.58
SYNE4Q8N205 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.21□□□□□ -1.58
SYNE4Q8N205 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SYNE4Q8N205 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE4Q8N205 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SYNE4Q8N205 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SYNE4Q8N205 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.2□□□□□ -1.58
SYNE4Q8N205 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SYNE4Q8N205 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SYNE4Q8N205 RNA5SP124-201ENST00000362739 110 ntBASIC5.2□□□□□ -1.58
SYNE4Q8N205 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.2□□□□□ -1.58
SYNE4Q8N205 SNORA62.2-201ENST00000364672 152 ntBASIC5.2□□□□□ -1.58
SYNE4Q8N205 AC092745.2-202ENST00000411880 369 ntBASIC5.2□□□□□ -1.58
SYNE4Q8N205 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.2□□□□□ -1.58
SYNE4Q8N205 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.2□□□□□ -1.58
SYNE4Q8N205 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.2□□□□□ -1.58
SYNE4Q8N205 AC234064.1-201ENST00000436312 247 ntBASIC5.2□□□□□ -1.58
SYNE4Q8N205 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5.2□□□□□ -1.58
SYNE4Q8N205 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SYNE4Q8N205 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.2□□□□□ -1.58
SYNE4Q8N205 DNAJC19P8-201ENST00000452887 259 ntBASIC5.2□□□□□ -1.58
SYNE4Q8N205 SNRPGP9-201ENST00000456025 225 ntBASIC5.2□□□□□ -1.58
SYNE4Q8N205 AL445433.1-201ENST00000457507 257 ntBASIC5.2□□□□□ -1.58
SYNE4Q8N205 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.2□□□□□ -1.58
SYNE4Q8N205 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.2□□□□□ -1.58
SYNE4Q8N205 AC104108.1-201ENST00000509930 412 ntBASIC5.2□□□□□ -1.58
SYNE4Q8N205 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.2□□□□□ -1.58
SYNE4Q8N205 AC010285.3-201ENST00000511668 676 ntBASIC5.2□□□□□ -1.58
SYNE4Q8N205 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.2□□□□□ -1.58
SYNE4Q8N205 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.2□□□□□ -1.58
SYNE4Q8N205 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.2□□□□□ -1.58
SYNE4Q8N205 AC074029.1-201ENST00000552531 1044 ntBASIC5.2□□□□□ -1.58
SYNE4Q8N205 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.2□□□□□ -1.58
SYNE4Q8N205 RN7SL435P-201ENST00000584418 282 ntBASIC5.2□□□□□ -1.58
SYNE4Q8N205 AC005771.1-201ENST00000585581 349 ntBASIC5.2□□□□□ -1.58
SYNE4Q8N205 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.2□□□□□ -1.58
SYNE4Q8N205 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.2□□□□□ -1.58
SYNE4Q8N205 AC091805.2-201ENST00000603848 235 ntBASIC5.2□□□□□ -1.58
SYNE4Q8N205 BNIP3P4-201ENST00000604946 565 ntBASIC5.2□□□□□ -1.58
SYNE4Q8N205 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SYNE4Q8N205 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SYNE4Q8N205 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SYNE4Q8N205 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.2□□□□□ -1.58
SYNE4Q8N205 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SYNE4Q8N205 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.2□□□□□ -1.58
SYNE4Q8N205 AC011477.1-204ENST00000623416 1325 ntBASIC5.2□□□□□ -1.58
SYNE4Q8N205 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.2□□□□□ -1.58
SYNE4Q8N205 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
SYNE4Q8N205 AC092447.7-201ENST00000422212 1621 ntBASIC5.19□□□□□ -1.58
SYNE4Q8N205 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SYNE4Q8N205 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.19□□□□□ -1.58
SYNE4Q8N205 AC116667.1-201ENST00000604855 2072 ntBASIC5.19□□□□□ -1.58
SYNE4Q8N205 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SYNE4Q8N205 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SYNE4Q8N205 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SYNE4Q8N205 SNORA73.2-201ENST00000364946 201 ntBASIC5.19□□□□□ -1.58
SYNE4Q8N205 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SYNE4Q8N205 AL590704.1-201ENST00000402856 794 ntBASIC5.19□□□□□ -1.58
SYNE4Q8N205 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.19□□□□□ -1.58
SYNE4Q8N205 AL050321.1-201ENST00000432363 400 ntBASIC5.19□□□□□ -1.58
SYNE4Q8N205 LARP1BP3-201ENST00000437229 869 ntBASIC5.19□□□□□ -1.58
SYNE4Q8N205 ST13P20-201ENST00000447996 1065 ntBASIC5.19□□□□□ -1.58
SYNE4Q8N205 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.19□□□□□ -1.58
SYNE4Q8N205 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.19□□□□□ -1.58
SYNE4Q8N205 RNU7-27P-201ENST00000459281 62 ntBASIC5.19□□□□□ -1.58
SYNE4Q8N205 AC112206.1-201ENST00000468416 477 ntBASIC5.19□□□□□ -1.58
SYNE4Q8N205 WBP1LP4-201ENST00000505043 344 ntBASIC5.19□□□□□ -1.58
SYNE4Q8N205 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.19□□□□□ -1.58
SYNE4Q8N205 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.19□□□□□ -1.58
SYNE4Q8N205 AC109464.2-201ENST00000510242 943 ntBASIC5.19□□□□□ -1.58
SYNE4Q8N205 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.19□□□□□ -1.58
SYNE4Q8N205 AC025881.1-201ENST00000518851 512 ntBASIC5.19□□□□□ -1.58
SYNE4Q8N205 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.19□□□□□ -1.58
SYNE4Q8N205 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.19□□□□□ -1.58
SYNE4Q8N205 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC5.19□□□□□ -1.58
SYNE4Q8N205 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.19□□□□□ -1.58
SYNE4Q8N205 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
SYNE4Q8N205 MIR3200-201ENST00000580767 85 ntBASIC5.19□□□□□ -1.58
SYNE4Q8N205 AP001542.2-201ENST00000593141 364 ntBASIC5.19□□□□□ -1.58
SYNE4Q8N205 AC015871.2-201ENST00000603605 948 ntBASIC5.19□□□□□ -1.58
SYNE4Q8N205 NDUFA8P1-201ENST00000605525 367 ntBASIC5.19□□□□□ -1.58
SYNE4Q8N205 AC091946.2-201ENST00000606105 291 ntBASIC5.19□□□□□ -1.58
SYNE4Q8N205 AP005137.2-201ENST00000609238 400 ntBASIC5.19□□□□□ -1.58
SYNE4Q8N205 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SYNE4Q8N205 AL121772.2-201ENST00000614331 297 ntBASIC5.19□□□□□ -1.58
SYNE4Q8N205 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.19□□□□□ -1.58
SYNE4Q8N205 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SYNE4Q8N205 AC016588.2-201ENST00000632484 3021 ntBASIC5.19□□□□□ -1.58
SYNE4Q8N205 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SYNE4Q8N205 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SYNE4Q8N205 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SYNE4Q8N205 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.19□□□□□ -1.58
SYNE4Q8N205 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.19□□□□□ -1.58
SYNE4Q8N205 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SYNE4Q8N205 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.19□□□□□ -1.58
SYNE4Q8N205 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.19□□□□□ -1.58
SYNE4Q8N205 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE4Q8N205 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms