Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC026402.1-201ENST00000513642 170 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AC008694.2-201ENST00000517591 306 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AP000811.1-201ENST00000603803 651 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AC004223.4-201ENST00000612426 332 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AC243773.3-201ENST00000613270 256 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AL354976.1-201ENST00000613843 387 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 MIR8059-201ENST00000620427 81 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 DDX18P3-201ENST00000404856 2007 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AC011477.1-204ENST00000623416 1325 ntBASIC3.96□□□□□ -1.77
BEST3Q8N1M1 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
BEST3Q8N1M1 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
BEST3Q8N1M1 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.96□□□□□ -1.77
BEST3Q8N1M1 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.77
BEST3Q8N1M1 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
BEST3Q8N1M1 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 RNU1-14P-201ENST00000362759 152 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 RNU6-553P-201ENST00000364047 96 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 RHOT1P2-201ENST00000366423 333 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 RNU1-44P-201ENST00000384453 163 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 SNRPEP2-201ENST00000397592 279 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 RNA5SP317-201ENST00000410176 116 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 RNA5SP311-201ENST00000411290 116 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 RPS15AP38-201ENST00000413110 372 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC073136.2-201ENST00000417282 849 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC073335.1-201ENST00000427776 363 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 OR4F13P-201ENST00000428478 931 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 RPEP2-201ENST00000432149 701 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 TRGVB-201ENST00000453257 471 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 RPL7P22-201ENST00000466005 733 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 SYPL1P1-201ENST00000473622 768 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 RPL30P6-201ENST00000475925 342 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC026412.2-201ENST00000512270 1075 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 RNA5SP315-201ENST00000516340 116 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 RNA5SP312-201ENST00000517068 116 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 IGLV3-26-201ENST00000520756 302 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC090151.1-201ENST00000520784 730 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC069240.1-201ENST00000548774 375 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC008127.2-201ENST00000549925 1075 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC084824.1-201ENST00000550917 1005 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AL352979.3-201ENST00000553515 247 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC067852.4-201ENST00000590314 478 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC010620.1-201ENST00000601088 1102 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AL161729.3-201ENST00000603533 673 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AL163642.2-201ENST00000604722 1019 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC018714.1-201ENST00000605028 208 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC124312.4-201ENST00000605533 310 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC113194.1-201ENST00000606037 500 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC072039.2-201ENST00000608883 439 ntBASIC3.96□□□□□ -1.78
BEST3Q8N1M1 AC093783.1-201ENST00000612976 329 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms