Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 AL590399.6-201ENST00000446396 307 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 SLC31A1P1-201ENST00000451221 567 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 BX248409.1-201ENST00000455497 255 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 RPS27P29-201ENST00000463110 252 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 AC078857.1-201ENST00000469870 667 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 AP003717.3-201ENST00000544832 1180 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 AC010735.1-201ENST00000567305 1026 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 AC053481.4-201ENST00000583164 216 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 AC011816.2-201ENST00000607089 556 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 AC021851.1-201ENST00000608537 1082 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 AC112503.2-201ENST00000609005 552 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 MIR8084-201ENST00000614105 89 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 AL162574.2-201ENST00000614618 657 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 AC011978.2-201ENST00000569835 2054 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 AC090337.1-201ENST00000579651 2074 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 MTCO1P24-201ENST00000515438 1558 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 MIR591-201ENST00000385290 95 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 SNORA48.8-201ENST00000391324 134 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 EI24P1-201ENST00000416584 867 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 DBIP2-201ENST00000419076 262 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 PAICSP7-201ENST00000419829 962 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 MTATP6P11-201ENST00000428071 670 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 UBE2V1P1-201ENST00000430836 445 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 RPL17P35-201ENST00000432217 549 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 B3GNT2P1-201ENST00000434960 952 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 RPL23AP22-201ENST00000437556 453 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AC006994.1-201ENST00000438212 839 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AC005002.1-201ENST00000447458 540 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 HMGN2P16-201ENST00000456802 261 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AC114967.1-201ENST00000504890 259 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 PHBP14-201ENST00000512887 367 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AC026402.1-201ENST00000513642 170 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AC027338.1-201ENST00000514840 825 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 SNORA70.18-201ENST00000516696 98 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AP003168.1-201ENST00000530091 307 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AC007224.1-201ENST00000564410 144 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 MIR4504-201ENST00000577413 92 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 MIR4697-201ENST00000582977 78 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AC017100.2-201ENST00000584628 355 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AC067852.3-201ENST00000589177 561 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AC005156.1-201ENST00000613371 573 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AL512506.1-201ENST00000613918 449 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AC020923.1-201ENST00000624021 917 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AL356094.1-201ENST00000624663 1212 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 AC119674.1-207ENST00000641355 633 ntBASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.38□□□□□ -1.87
NUDCD3Q8IVD9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 RPL7P26-201ENST00000333817 754 ntBASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 SNORD9-201ENST00000362566 104 ntBASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 RNU6-1243P-201ENST00000364028 107 ntBASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 SNORA7.2-201ENST00000364446 145 ntBASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 MIR525-201ENST00000384978 85 ntBASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 RSL24D1P1-201ENST00000404972 493 ntBASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 AC004975.1-201ENST00000428733 208 ntBASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 RPL21P110-201ENST00000433345 446 ntBASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 FTH1P1-201ENST00000437933 532 ntBASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 RRM2P4-201ENST00000441721 562 ntBASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 AL929288.2-201ENST00000446368 407 ntBASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 RPS4XP13-201ENST00000483219 789 ntBASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 KCTD9P5-201ENST00000504141 1170 ntBASIC3.37□□□□□ -1.87
NUDCD3Q8IVD9 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms