Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MTND4P34-201ENST00000572715 1371 ntBASIC2.83□□□□□ -1.96
LRRC28Q86X40 API5P2-201ENST00000397055 1498 ntBASIC2.83□□□□□ -1.96
LRRC28Q86X40 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
LRRC28Q86X40 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LRRC28Q86X40 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LRRC28Q86X40 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
LRRC28Q86X40 AC093908.1-201ENST00000623125 8092 ntBASIC2.82□□□□□ -1.96
LRRC28Q86X40 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
LRRC28Q86X40 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LRRC28Q86X40 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
LRRC28Q86X40 TAF9BP1-201ENST00000396646 746 ntBASIC2.82□□□□□ -1.96
LRRC28Q86X40 RNA5SP120-201ENST00000410900 112 ntBASIC2.82□□□□□ -1.96
LRRC28Q86X40 RNA5SP344-201ENST00000411081 104 ntBASIC2.82□□□□□ -1.96
LRRC28Q86X40 RPL21P112-201ENST00000434403 463 ntBASIC2.82□□□□□ -1.96
LRRC28Q86X40 AC093716.1-201ENST00000435923 377 ntBASIC2.82□□□□□ -1.96
LRRC28Q86X40 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.82□□□□□ -1.96
LRRC28Q86X40 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.82□□□□□ -1.96
LRRC28Q86X40 OR7L1P-201ENST00000456181 380 ntBASIC2.82□□□□□ -1.96
LRRC28Q86X40 RPS4XP10-201ENST00000465034 731 ntBASIC2.82□□□□□ -1.96
LRRC28Q86X40 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.82□□□□□ -1.96
LRRC28Q86X40 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
LRRC28Q86X40 RPL31P13-201ENST00000484151 370 ntBASIC2.82□□□□□ -1.96
LRRC28Q86X40 RPL21P13-201ENST00000488305 481 ntBASIC2.82□□□□□ -1.96
LRRC28Q86X40 APOOP4-201ENST00000513530 597 ntBASIC2.82□□□□□ -1.96
LRRC28Q86X40 AC239860.2-201ENST00000525886 270 ntBASIC2.82□□□□□ -1.96
LRRC28Q86X40 AC007536.1-201ENST00000533382 349 ntBASIC2.82□□□□□ -1.96
LRRC28Q86X40 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.82□□□□□ -1.96
LRRC28Q86X40 MIR4276-201ENST00000584832 70 ntBASIC2.82□□□□□ -1.96
LRRC28Q86X40 AC012213.4-201ENST00000606457 354 ntBASIC2.82□□□□□ -1.96
LRRC28Q86X40 AC139769.3-201ENST00000618383 175 ntBASIC2.82□□□□□ -1.96
LRRC28Q86X40 AC127502.3-201ENST00000636170 1206 ntBASIC2.82□□□□□ -1.96
LRRC28Q86X40 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
LRRC28Q86X40 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.82□□□□□ -1.96
LRRC28Q86X40 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.82□□□□□ -1.96
LRRC28Q86X40 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.82□□□□□ -1.96
LRRC28Q86X40 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.82□□□□□ -1.96
LRRC28Q86X40 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
LRRC28Q86X40 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
LRRC28Q86X40 ZNF33CP-201ENST00000432492 2030 ntBASIC2.81□□□□□ -1.96
LRRC28Q86X40 AC073346.2-201ENST00000624724 2058 ntBASIC2.81□□□□□ -1.96
LRRC28Q86X40 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LRRC28Q86X40 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LRRC28Q86X40 RNU1-70P-201ENST00000362618 164 ntBASIC2.81□□□□□ -1.96
LRRC28Q86X40 RNA5SP387-201ENST00000364226 106 ntBASIC2.81□□□□□ -1.96
LRRC28Q86X40 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
LRRC28Q86X40 RPL31P1-201ENST00000398116 372 ntBASIC2.81□□□□□ -1.96
LRRC28Q86X40 HMGN1P24-201ENST00000412282 298 ntBASIC2.81□□□□□ -1.96
LRRC28Q86X40 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.81□□□□□ -1.96
LRRC28Q86X40 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LRRC28Q86X40 AC005326.1-201ENST00000429197 123 ntBASIC2.81□□□□□ -1.96
LRRC28Q86X40 HMGB1P45-201ENST00000435986 653 ntBASIC2.81□□□□□ -1.96
LRRC28Q86X40 RPS12P18-201ENST00000442381 270 ntBASIC2.81□□□□□ -1.96
LRRC28Q86X40 SSXP4-201ENST00000451349 245 ntBASIC2.81□□□□□ -1.96
LRRC28Q86X40 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LRRC28Q86X40 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC2.81□□□□□ -1.96
LRRC28Q86X40 ARL4AP2-201ENST00000507378 601 ntBASIC2.81□□□□□ -1.96
LRRC28Q86X40 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.81□□□□□ -1.96
LRRC28Q86X40 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.81□□□□□ -1.96
LRRC28Q86X40 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.81□□□□□ -1.96
LRRC28Q86X40 AC005476.1-201ENST00000554427 397 ntBASIC2.81□□□□□ -1.96
LRRC28Q86X40 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.81□□□□□ -1.96
LRRC28Q86X40 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.81□□□□□ -1.96
LRRC28Q86X40 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.81□□□□□ -1.96
LRRC28Q86X40 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.81□□□□□ -1.96
LRRC28Q86X40 YWHAQP7-201ENST00000603536 658 ntBASIC2.81□□□□□ -1.96
LRRC28Q86X40 AC084035.1-201ENST00000634543 607 ntBASIC2.81□□□□□ -1.96
LRRC28Q86X40 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.81□□□□□ -1.96
LRRC28Q86X40 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.81□□□□□ -1.96
LRRC28Q86X40 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.81□□□□□ -1.96
LRRC28Q86X40 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LRRC28Q86X40 AL136164.4-201ENST00000625013 2135 ntBASIC2.81□□□□□ -1.96
LRRC28Q86X40 AC108206.1-201ENST00000570186 4159 ntBASIC2.81□□□□□ -1.96
LRRC28Q86X40 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.8□□□□□ -1.96
LRRC28Q86X40 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
LRRC28Q86X40 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LRRC28Q86X40 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LRRC28Q86X40 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.8□□□□□ -1.96
LRRC28Q86X40 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LRRC28Q86X40 RPL23AP57-201ENST00000332361 466 ntBASIC2.8□□□□□ -1.96
LRRC28Q86X40 Y_RNA.333-201ENST00000365274 102 ntBASIC2.8□□□□□ -1.96
LRRC28Q86X40 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LRRC28Q86X40 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.8□□□□□ -1.96
LRRC28Q86X40 AC005300.1-201ENST00000428401 373 ntBASIC2.8□□□□□ -1.96
LRRC28Q86X40 RPL21P40-201ENST00000428586 483 ntBASIC2.8□□□□□ -1.96
LRRC28Q86X40 YWHAZP7-201ENST00000436906 631 ntBASIC2.8□□□□□ -1.96
LRRC28Q86X40 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.8□□□□□ -1.96
LRRC28Q86X40 AC104978.1-201ENST00000449387 391 ntBASIC2.8□□□□□ -1.96
LRRC28Q86X40 CCRL1P1-201ENST00000449542 1053 ntBASIC2.8□□□□□ -1.96
LRRC28Q86X40 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LRRC28Q86X40 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.8□□□□□ -1.96
LRRC28Q86X40 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.8□□□□□ -1.96
LRRC28Q86X40 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.8□□□□□ -1.96
LRRC28Q86X40 SNORD116-30-201ENST00000516468 85 ntBASIC2.8□□□□□ -1.96
LRRC28Q86X40 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.8□□□□□ -1.96
LRRC28Q86X40 AC010653.1-201ENST00000571108 881 ntBASIC2.8□□□□□ -1.96
LRRC28Q86X40 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.8□□□□□ -1.96
LRRC28Q86X40 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.8□□□□□ -1.96
LRRC28Q86X40 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.8□□□□□ -1.96
LRRC28Q86X40 AC131902.3-201ENST00000611767 581 ntBASIC2.8□□□□□ -1.96
LRRC28Q86X40 AC073348.1-201ENST00000623002 331 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms