Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RNA5SP30-201ENST00000365552 115 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 RNU11-201ENST00000387069 134 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 AC005522.1-201ENST00000395416 346 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 SOD2P1-201ENST00000396543 562 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 RN7SKP206-201ENST00000410823 293 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 Y_RNA.646-201ENST00000410980 101 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 AC096921.1-201ENST00000411661 375 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 RNF10P1-201ENST00000418589 369 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 AP000281.1-201ENST00000444036 316 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 AL161722.1-201ENST00000446972 1032 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 AC073909.1-201ENST00000447112 999 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 RPS15AP17-201ENST00000470598 390 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 SNRPCP3-201ENST00000474888 476 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 RPL5P22-201ENST00000480199 884 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 RN7SL273P-201ENST00000481561 299 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 RPS17P5-201ENST00000498293 408 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 HSPD1P15-201ENST00000505573 1122 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 AC011411.1-201ENST00000509592 876 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 RNA5SP337-201ENST00000517007 109 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 COX6CP8-201ENST00000522620 226 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 AC103843.2-201ENST00000530523 682 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 IMMP1LP2-201ENST00000552954 492 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 AC069061.3-201ENST00000582254 823 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 AL360012.1-201ENST00000602813 131 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 RN7SL787P-201ENST00000613000 284 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 AC130324.3-201ENST00000614165 542 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.15□□□□□ -1.58
ATG4DQ86TL0 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ATG4DQ86TL0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ATG4DQ86TL0 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.15□□□□□ -1.58
ATG4DQ86TL0 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.15□□□□□ -1.58
ATG4DQ86TL0 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.15□□□□□ -1.58
ATG4DQ86TL0 AC020633.1-201ENST00000468439 2247 ntBASIC5.15□□□□□ -1.58
ATG4DQ86TL0 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
ATG4DQ86TL0 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
ATG4DQ86TL0 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ATG4DQ86TL0 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.15□□□□□ -1.58
ATG4DQ86TL0 RNF6P1-201ENST00000444889 1784 ntBASIC5.15□□□□□ -1.58
ATG4DQ86TL0 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ATG4DQ86TL0 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AL121886.1-201ENST00000358609 435 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 RNA5SP326-201ENST00000363209 110 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 RNU4-48P-201ENST00000365559 182 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 RNY1P14-201ENST00000384426 108 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AC005042.1-201ENST00000393397 800 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 HMGB1P17-201ENST00000403495 628 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 TPMTP2-201ENST00000414372 726 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AL354868.1-201ENST00000417077 482 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 TMEM183AP1-205ENST00000432739 290 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AC099670.2-201ENST00000435130 321 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AC005019.1-201ENST00000436455 431 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AC002381.1-201ENST00000447049 280 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 RPL7P52-201ENST00000449200 742 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 NXT1P1-201ENST00000458481 316 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AC022215.1-201ENST00000481770 362 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AC058823.1-201ENST00000485315 474 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AL049874.2-201ENST00000492636 288 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 IGKV2D-10-201ENST00000520194 281 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AC112191.2-201ENST00000522428 333 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AC008126.1-201ENST00000549019 480 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 HSPE1P2-201ENST00000554777 306 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms