Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AL133243.3-201ENST00000617415 3004 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 AC012020.1-201ENST00000624541 1728 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 OR11H4-201ENST00000315409 1082 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 RPL23P2-201ENST00000320371 421 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 RPL23AP57-201ENST00000332361 466 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 MIR223-201ENST00000385204 110 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 MIR921-201ENST00000401133 56 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 RPL23AP48-201ENST00000406913 488 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 RN7SKP266-201ENST00000410232 287 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 Y_RNA.598-201ENST00000410480 95 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 RNA5SP345-201ENST00000410646 108 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 RNU6-248P-201ENST00000410720 107 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 OR8G2P-201ENST00000412796 908 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 RPS12P23-201ENST00000419579 400 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 AC109583.1-201ENST00000432156 268 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 RPL36AP15-201ENST00000444514 266 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 AC133473.1-201ENST00000455173 299 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 RPL31P50-201ENST00000471002 296 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 RPL23AP65-201ENST00000475608 468 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 AP000926.1-201ENST00000479573 241 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 LARP1BP2-201ENST00000486594 519 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 RN7SL97P-201ENST00000486780 299 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 RN7SL30P-201ENST00000488416 306 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 AC134698.4-201ENST00000523451 826 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 AL049839.1-201ENST00000556151 657 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 AL121834.1-201ENST00000572284 509 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 MIR4489-201ENST00000578869 62 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 MIR1269B-201ENST00000580405 75 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 MIR4310-201ENST00000582950 57 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 AC022916.3-201ENST00000592961 742 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 MEMO1P5-201ENST00000604810 406 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 AC131902.3-201ENST00000611767 581 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 AC022467.1-201ENST00000614738 749 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 AC104010.1-201ENST00000616889 150 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 MIR6864-201ENST00000617935 70 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 MTND5P28-201ENST00000438005 1594 ntBASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.35□□□□□ -1.71
PTCHD4Q6ZW05 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 RNU6-533P-201ENST00000384144 107 ntBASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 RNU6-1226P-201ENST00000384317 107 ntBASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 RNU1-106P-201ENST00000384382 164 ntBASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 RPS3AP23-201ENST00000401762 784 ntBASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 MIR1305-201ENST00000408300 86 ntBASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 RNA5SP146-201ENST00000410743 123 ntBASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 HMGB3P23-201ENST00000414981 585 ntBASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 RAD23BP1-201ENST00000421404 1227 ntBASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 AL513174.1-201ENST00000423182 629 ntBASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 COX6CP15-201ENST00000426313 211 ntBASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 AL445669.1-201ENST00000426743 755 ntBASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 FTH1P6-201ENST00000430768 320 ntBASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 RPS17P8-201ENST00000434525 335 ntBASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 NPM1P49-201ENST00000448027 714 ntBASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 AL590365.1-201ENST00000450788 243 ntBASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 BX322784.1-201ENST00000455793 1077 ntBASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 BTF3P5-201ENST00000457252 467 ntBASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 TMED11P-201ENST00000479478 690 ntBASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 RN7SL319P-201ENST00000480656 221 ntBASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 AC090453.1-201ENST00000495560 436 ntBASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 AL358832.1-201ENST00000497800 389 ntBASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 HMGB1P21-201ENST00000502313 581 ntBASIC4.34□□□□□ -1.71
PTCHD4Q6ZW05 AC022447.3-201ENST00000506865 495 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms