Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 AC109486.1-201ENST00000486833 374 ntBASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 AC006499.5-201ENST00000505037 514 ntBASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 MTCYBP43-201ENST00000513621 740 ntBASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 RN7SKP46-201ENST00000515942 234 ntBASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 SNORA31.9-201ENST00000516429 84 ntBASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 PTP4A1P6-201ENST00000531034 478 ntBASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 AP001004.1-201ENST00000582468 324 ntBASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 AL354984.3-201ENST00000604803 325 ntBASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 AC012557.2-201ENST00000605919 418 ntBASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 AL513477.2-201ENST00000607858 568 ntBASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 AC106028.5-201ENST00000610332 395 ntBASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 AL158063.1-201ENST00000615349 536 ntBASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 AC099669.2-201ENST00000616549 437 ntBASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 MIR3653-201ENST00000625572 110 ntBASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 MAPK10-286ENST00000641208 8747 ntBASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
SWSAP1Q6NVH7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 RNU6-623P-201ENST00000363143 105 ntBASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 AL831737.1-201ENST00000441288 271 ntBASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 VN1R32P-201ENST00000452234 905 ntBASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 AL445433.1-201ENST00000457507 257 ntBASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 AL591473.1-201ENST00000464297 313 ntBASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 UQCRHP4-201ENST00000471686 272 ntBASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 AC116337.2-201ENST00000477662 156 ntBASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 AC068587.1-201ENST00000483613 781 ntBASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 RNA5SP360-201ENST00000516555 118 ntBASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 HIGD1AP10-201ENST00000527837 282 ntBASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 AL022161.1-201ENST00000604390 213 ntBASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 AC010201.1-201ENST00000605051 540 ntBASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 Z98200.1-201ENST00000607298 470 ntBASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 AC122108.2-201ENST00000611946 526 ntBASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 AL021997.2-201ENST00000615674 271 ntBASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 CYP3A51P-201ENST00000633513 256 ntBASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
SWSAP1Q6NVH7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.86□□□□□ -1.63
SWSAP1Q6NVH7 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SWSAP1Q6NVH7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.86□□□□□ -1.63
SWSAP1Q6NVH7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
SWSAP1Q6NVH7 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SWSAP1Q6NVH7 RPL23AP57-201ENST00000332361 466 ntBASIC4.86□□□□□ -1.63
SWSAP1Q6NVH7 AL672167.1-206ENST00000356293 943 ntBASIC4.86□□□□□ -1.63
SWSAP1Q6NVH7 RNA5SP307-201ENST00000362863 116 ntBASIC4.86□□□□□ -1.63
SWSAP1Q6NVH7 RNA5SP175-201ENST00000364275 119 ntBASIC4.86□□□□□ -1.63
SWSAP1Q6NVH7 U3.15-201ENST00000365398 212 ntBASIC4.86□□□□□ -1.63
SWSAP1Q6NVH7 EIF5P1-201ENST00000400019 1231 ntBASIC4.86□□□□□ -1.63
SWSAP1Q6NVH7 AL355379.1-201ENST00000405542 640 ntBASIC4.86□□□□□ -1.63
SWSAP1Q6NVH7 MIR1250-201ENST00000408098 113 ntBASIC4.86□□□□□ -1.63
SWSAP1Q6NVH7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.86□□□□□ -1.63
SWSAP1Q6NVH7 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SWSAP1Q6NVH7 AC092017.2-201ENST00000427600 362 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms