Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AL596266.1-201ENST00000448132 400 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.77□□□□□ -1.49
RNF43Q68DV7 Y_RNA.635-201ENST00000459041 101 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 SNORD125-201ENST00000459538 96 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 RPL35AP28-201ENST00000459730 331 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.77□□□□□ -1.49
RNF43Q68DV7 AC108161.1-201ENST00000461060 402 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 AC007547.1-201ENST00000462177 490 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 RPL7AP6-201ENST00000477943 801 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 RPS4XP1-201ENST00000482189 787 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 RPS27P23-201ENST00000487608 251 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 SMURF2P1-201ENST00000514992 481 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.77□□□□□ -1.49
RNF43Q68DV7 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.77□□□□□ -1.49
RNF43Q68DV7 MRPS21P7-201ENST00000566937 238 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 AC009852.2-201ENST00000567898 485 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.77□□□□□ -1.49
RNF43Q68DV7 RN7SL708P-201ENST00000580952 299 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.77□□□□□ -1.49
RNF43Q68DV7 APOOP1-201ENST00000604695 592 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 AC022418.1-201ENST00000624118 445 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.77□□□□□ -1.49
RNF43Q68DV7 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.77□□□□□ -1.49
RNF43Q68DV7 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RNF43Q68DV7 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RNF43Q68DV7 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RNF43Q68DV7 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
RNF43Q68DV7 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RNF43Q68DV7 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RNF43Q68DV7 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.76□□□□□ -1.49
RNF43Q68DV7 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RNF43Q68DV7 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF43Q68DV7 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF43Q68DV7 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
RNF43Q68DV7 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.76□□□□□ -1.49
RNF43Q68DV7 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF43Q68DV7 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF43Q68DV7 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
RNF43Q68DV7 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RNF43Q68DV7 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.76□□□□□ -1.49
RNF43Q68DV7 OR1S2-201ENST00000302592 978 ntBASIC5.76□□□□□ -1.49
RNF43Q68DV7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RNF43Q68DV7 RNA5SP319-201ENST00000362768 119 ntBASIC5.76□□□□□ -1.49
RNF43Q68DV7 RNU6-532P-201ENST00000384318 107 ntBASIC5.76□□□□□ -1.49
RNF43Q68DV7 MIR506-201ENST00000384998 124 ntBASIC5.76□□□□□ -1.49
RNF43Q68DV7 RPL7P25-201ENST00000404151 721 ntBASIC5.76□□□□□ -1.49
RNF43Q68DV7 RNU6-985P-201ENST00000410182 104 ntBASIC5.76□□□□□ -1.49
RNF43Q68DV7 CHEK2P3-201ENST00000416118 248 ntBASIC5.76□□□□□ -1.49
RNF43Q68DV7 AL807761.1-201ENST00000417622 171 ntBASIC5.76□□□□□ -1.49
RNF43Q68DV7 SLC35E1P1-201ENST00000419313 864 ntBASIC5.76□□□□□ -1.49
RNF43Q68DV7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.76□□□□□ -1.49
RNF43Q68DV7 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.76□□□□□ -1.49
RNF43Q68DV7 RBMY2QP-201ENST00000429799 1147 ntBASIC5.76□□□□□ -1.49
RNF43Q68DV7 FTH1P2-201ENST00000466086 412 ntBASIC5.76□□□□□ -1.49
RNF43Q68DV7 AL035404.1-201ENST00000497982 568 ntBASIC5.76□□□□□ -1.49
RNF43Q68DV7 AC022616.6-201ENST00000520479 119 ntBASIC5.76□□□□□ -1.49
RNF43Q68DV7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.76□□□□□ -1.49
RNF43Q68DV7 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.76□□□□□ -1.49
RNF43Q68DV7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.76□□□□□ -1.49
RNF43Q68DV7 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.76□□□□□ -1.49
RNF43Q68DV7 HMGB1P6-201ENST00000569046 646 ntBASIC5.76□□□□□ -1.49
RNF43Q68DV7 MYL12BP1-201ENST00000569826 507 ntBASIC5.76□□□□□ -1.49
RNF43Q68DV7 MIR4680-201ENST00000580906 66 ntBASIC5.76□□□□□ -1.49
RNF43Q68DV7 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RNF43Q68DV7 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RNF43Q68DV7 AC012616.1-201ENST00000600294 197 ntBASIC5.76□□□□□ -1.49
RNF43Q68DV7 RPL26P30-202ENST00000602923 645 ntBASIC5.76□□□□□ -1.49
RNF43Q68DV7 CYP2C61P-201ENST00000604072 290 ntBASIC5.76□□□□□ -1.49
RNF43Q68DV7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.76□□□□□ -1.49
RNF43Q68DV7 AC099494.2-201ENST00000623371 978 ntBASIC5.76□□□□□ -1.49
RNF43Q68DV7 OR2L1P-202ENST00000641567 1023 ntBASIC5.76□□□□□ -1.49
RNF43Q68DV7 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RNF43Q68DV7 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RNF43Q68DV7 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF43Q68DV7 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RNF43Q68DV7 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.76□□□□□ -1.49
RNF43Q68DV7 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.76□□□□□ -1.49
RNF43Q68DV7 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RNF43Q68DV7 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RNF43Q68DV7 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF43Q68DV7 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF43Q68DV7 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF43Q68DV7 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RNF43Q68DV7 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RNF43Q68DV7 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF43Q68DV7 Y_RNA.46-201ENST00000362695 102 ntBASIC5.75□□□□□ -1.49
RNF43Q68DV7 RN7SKP103-201ENST00000363848 320 ntBASIC5.75□□□□□ -1.49
RNF43Q68DV7 Y_RNA.187-201ENST00000363918 113 ntBASIC5.75□□□□□ -1.49
RNF43Q68DV7 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF43Q68DV7 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RNF43Q68DV7 RPS6P23-201ENST00000413224 722 ntBASIC5.75□□□□□ -1.49
RNF43Q68DV7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.75□□□□□ -1.49
RNF43Q68DV7 RBMY2KP-201ENST00000418221 992 ntBASIC5.75□□□□□ -1.49
RNF43Q68DV7 AC007161.1-204ENST00000423039 460 ntBASIC5.75□□□□□ -1.49
RNF43Q68DV7 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.75□□□□□ -1.49
RNF43Q68DV7 RPL7P4-203ENST00000430239 730 ntBASIC5.75□□□□□ -1.49
RNF43Q68DV7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.75□□□□□ -1.49
RNF43Q68DV7 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF43Q68DV7 RPL21P133-201ENST00000443666 476 ntBASIC5.75□□□□□ -1.49
RNF43Q68DV7 CEACAMP7-201ENST00000444105 496 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms