Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.65□□□□□ -1.35
PRPF38BQ5VTL8 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
PRPF38BQ5VTL8 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 AC132219.2-201ENST00000624416 2327 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 Y_RNA.404-201ENST00000383978 102 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 RNU1-106P-201ENST00000384382 164 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 RNU6-1127P-201ENST00000384580 107 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 MIR23B-201ENST00000384832 97 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 MIR1204-201ENST00000408388 67 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 RN7SKP159-201ENST00000410657 292 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 RNU6-516P-201ENST00000411381 104 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 RPL35AP3-201ENST00000414680 288 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 BX682237.1-201ENST00000415016 335 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 MTATP6P29-201ENST00000415057 132 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 GSTA6P-201ENST00000424144 582 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 AC105402.2-201ENST00000438503 358 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 AC104164.1-201ENST00000460282 590 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 RPL30P11-201ENST00000495304 339 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 Y_RNA.710-201ENST00000516975 110 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 AC139365.2-201ENST00000517972 253 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 OR8R1P-201ENST00000543943 764 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 PARP1P2-201ENST00000556806 195 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 AC104695.3-201ENST00000604052 296 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 AC062037.2-201ENST00000610137 73 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 U2.22-201ENST00000636441 106 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 AC011755.1-201ENST00000623763 2049 ntBASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
PRPF38BQ5VTL8 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 RNU6-960P-201ENST00000364056 120 ntBASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 AC008171.1-201ENST00000395058 200 ntBASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 AC016739.1-201ENST00000405359 345 ntBASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 RNU6-101P-201ENST00000410323 104 ntBASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 Y_RNA.594-201ENST00000410373 140 ntBASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 Z95327.1-201ENST00000446082 482 ntBASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 AC104634.1-201ENST00000452720 462 ntBASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 DYNLL1P5-201ENST00000467158 270 ntBASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 AC022034.3-201ENST00000471393 478 ntBASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 RPS18P6-201ENST00000476880 458 ntBASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 Y_RNA.670-201ENST00000516255 105 ntBASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 Y_RNA.721-201ENST00000517207 102 ntBASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 RN7SKP40-201ENST00000517211 242 ntBASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 GNAI2P1-201ENST00000541815 315 ntBASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 BNIP3P5-201ENST00000562290 498 ntBASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 AC008162.1-201ENST00000604718 254 ntBASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 AL670379.4-201ENST00000605279 254 ntBASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 AC012603.1-201ENST00000606424 528 ntBASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 NLRP3P1-201ENST00000622303 1785 ntBASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 AC005225.5-201ENST00000623547 2225 ntBASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms