Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC090666.1-201ENST00000578241 445 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 MIR4276-201ENST00000584832 70 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.99□□□□□ -1.77
GABPAQ06546 AP002906.1-201ENST00000603405 233 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.99□□□□□ -1.77
GABPAQ06546 AL136370.1-201ENST00000608166 691 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 AC000123.2-201ENST00000623124 461 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
GABPAQ06546 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.99□□□□□ -1.77
GABPAQ06546 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
GABPAQ06546 AC006504.1-201ENST00000562493 3666 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
GABPAQ06546 NSRP1P1-201ENST00000444067 1693 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 AL512646.1-201ENST00000269395 1077 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
GABPAQ06546 RNA5SP235-201ENST00000365411 114 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
GABPAQ06546 SNORA51.12-201ENST00000384448 134 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 RNU6-932P-201ENST00000391108 106 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 AL355143.1-201ENST00000407101 841 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 Z99755.1-201ENST00000414048 380 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.98□□□□□ -1.77
GABPAQ06546 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.98□□□□□ -1.77
GABPAQ06546 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.98□□□□□ -1.77
GABPAQ06546 ATP5C1P1-201ENST00000441945 895 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 AL929288.2-201ENST00000446368 407 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.98□□□□□ -1.77
GABPAQ06546 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
GABPAQ06546 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 HMGB1P21-201ENST00000502313 581 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.98□□□□□ -1.77
GABPAQ06546 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.98□□□□□ -1.77
GABPAQ06546 PRELID3BP4-201ENST00000515476 571 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.98□□□□□ -1.77
GABPAQ06546 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.98□□□□□ -1.77
GABPAQ06546 AP003102.1-201ENST00000525638 661 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
GABPAQ06546 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.98□□□□□ -1.77
GABPAQ06546 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.98□□□□□ -1.77
GABPAQ06546 AC037471.2-201ENST00000564941 598 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 CYP2C60P-201ENST00000566088 139 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 AC010735.1-201ENST00000567305 1026 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 AC099489.2-201ENST00000574976 260 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.98□□□□□ -1.77
GABPAQ06546 AC008507.2-201ENST00000588402 1176 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 AC006116.7-201ENST00000590141 756 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.98□□□□□ -1.77
GABPAQ06546 AL606834.2-201ENST00000602954 668 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 AL139286.1-201ENST00000604465 483 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 AC243756.2-201ENST00000618406 463 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 AP003476.1-201ENST00000623984 516 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.98□□□□□ -1.77
GABPAQ06546 AC244205.2-202ENST00000635781 342 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.98□□□□□ -1.77
GABPAQ06546 AC006927.2-201ENST00000639256 389 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.98□□□□□ -1.77
GABPAQ06546 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
GABPAQ06546 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.98□□□□□ -1.77
GABPAQ06546 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.98□□□□□ -1.77
GABPAQ06546 AL133412.1-201ENST00000380194 2992 ntBASIC3.98□□□□□ -1.77
GABPAQ06546 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
GABPAQ06546 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
GABPAQ06546 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
GABPAQ06546 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.97□□□□□ -1.77
GABPAQ06546 AC016716.1-201ENST00000265882 708 ntBASIC3.97□□□□□ -1.77
GABPAQ06546 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.97□□□□□ -1.77
GABPAQ06546 AL357075.1-201ENST00000404107 726 ntBASIC3.97□□□□□ -1.77
GABPAQ06546 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.97□□□□□ -1.77
GABPAQ06546 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.97□□□□□ -1.77
GABPAQ06546 AC004022.2-201ENST00000413824 193 ntBASIC3.97□□□□□ -1.77
GABPAQ06546 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.97□□□□□ -1.77
GABPAQ06546 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.97□□□□□ -1.77
GABPAQ06546 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.97□□□□□ -1.77
GABPAQ06546 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.97□□□□□ -1.77
GABPAQ06546 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.97□□□□□ -1.77
GABPAQ06546 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.97□□□□□ -1.77
GABPAQ06546 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.97□□□□□ -1.77
GABPAQ06546 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.97□□□□□ -1.77
GABPAQ06546 AC091862.1-201ENST00000438016 1100 ntBASIC3.97□□□□□ -1.77
GABPAQ06546 MTND1P33-201ENST00000446251 917 ntBASIC3.97□□□□□ -1.77
GABPAQ06546 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.97□□□□□ -1.77
GABPAQ06546 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.97□□□□□ -1.77
GABPAQ06546 AC104689.1-201ENST00000473356 768 ntBASIC3.97□□□□□ -1.77
GABPAQ06546 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.97□□□□□ -1.77
GABPAQ06546 AC018797.3-201ENST00000513388 1241 ntBASIC3.97□□□□□ -1.77
GABPAQ06546 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.97□□□□□ -1.77
GABPAQ06546 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.97□□□□□ -1.77
GABPAQ06546 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.97□□□□□ -1.77
GABPAQ06546 MIR4738-201ENST00000579134 87 ntBASIC3.97□□□□□ -1.77
GABPAQ06546 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.97□□□□□ -1.77
GABPAQ06546 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
GABPAQ06546 ZNF415P1-201ENST00000582279 1166 ntBASIC3.97□□□□□ -1.77
GABPAQ06546 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.97□□□□□ -1.77
GABPAQ06546 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.97□□□□□ -1.77
GABPAQ06546 AC012493.2-201ENST00000595083 291 ntBASIC3.97□□□□□ -1.77
GABPAQ06546 VN1R88P-201ENST00000596787 292 ntBASIC3.97□□□□□ -1.77
GABPAQ06546 AC133794.1-201ENST00000602731 914 ntBASIC3.97□□□□□ -1.77
GABPAQ06546 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.97□□□□□ -1.77
GABPAQ06546 AC005156.1-201ENST00000613371 573 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms