Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.42□□□□□ -2.02
CCL20P78556 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.42□□□□□ -2.02
CCL20P78556 SNORA70.17-201ENST00000516449 133 ntBASIC2.42□□□□□ -2.02
CCL20P78556 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.42□□□□□ -2.02
CCL20P78556 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.42□□□□□ -2.02
CCL20P78556 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.42□□□□□ -2.02
CCL20P78556 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.42□□□□□ -2.02
CCL20P78556 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.42□□□□□ -2.02
CCL20P78556 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC2.42□□□□□ -2.02
CCL20P78556 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.42□□□□□ -2.02
CCL20P78556 MIR2682-201ENST00000580305 110 ntBASIC2.42□□□□□ -2.02
CCL20P78556 AC013244.1-201ENST00000604279 193 ntBASIC2.42□□□□□ -2.02
CCL20P78556 AC024940.4-201ENST00000605507 246 ntBASIC2.42□□□□□ -2.02
CCL20P78556 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.42□□□□□ -2.02
CCL20P78556 AL390240.1-201ENST00000612950 384 ntBASIC2.42□□□□□ -2.02
CCL20P78556 MIR6875-201ENST00000617506 72 ntBASIC2.42□□□□□ -2.02
CCL20P78556 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.42□□□□□ -2.02
CCL20P78556 AC010435.1-201ENST00000623353 1177 ntBASIC2.42□□□□□ -2.02
CCL20P78556 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.42□□□□□ -2.02
CCL20P78556 AC119674.1-220ENST00000641502 1048 ntBASIC2.42□□□□□ -2.02
CCL20P78556 FAM35BP-202ENST00000497389 3337 ntBASIC2.42□□□□□ -2.02
CCL20P78556 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.42□□□□□ -2.02
CCL20P78556 AC073055.1-201ENST00000456901 1621 ntBASIC2.42□□□□□ -2.02
CCL20P78556 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCL20P78556 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCL20P78556 AC004925.1-201ENST00000624256 2706 ntBASIC2.41□□□□□ -2.02
CCL20P78556 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.41□□□□□ -2.02
CCL20P78556 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCL20P78556 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC2.41□□□□□ -2.02
CCL20P78556 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CCL20P78556 AL354719.1-201ENST00000406535 843 ntBASIC2.41□□□□□ -2.02
CCL20P78556 OR1AA1P-201ENST00000419597 916 ntBASIC2.41□□□□□ -2.02
CCL20P78556 RPL7P46-201ENST00000425129 740 ntBASIC2.41□□□□□ -2.02
CCL20P78556 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCL20P78556 CYCSP4-201ENST00000429682 331 ntBASIC2.41□□□□□ -2.02
CCL20P78556 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.41□□□□□ -2.02
CCL20P78556 AC108734.1-201ENST00000439549 399 ntBASIC2.41□□□□□ -2.02
CCL20P78556 AC114755.5-201ENST00000447760 831 ntBASIC2.41□□□□□ -2.02
CCL20P78556 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
CCL20P78556 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.41□□□□□ -2.02
CCL20P78556 RN7SL459P-201ENST00000481078 302 ntBASIC2.41□□□□□ -2.02
CCL20P78556 RPL7P38-201ENST00000488396 739 ntBASIC2.41□□□□□ -2.02
CCL20P78556 AC007686.1-201ENST00000488511 463 ntBASIC2.41□□□□□ -2.02
CCL20P78556 AL024509.2-201ENST00000493462 493 ntBASIC2.41□□□□□ -2.02
CCL20P78556 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.41□□□□□ -2.02
CCL20P78556 HMGB1P22-201ENST00000505315 124 ntBASIC2.41□□□□□ -2.02
CCL20P78556 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
CCL20P78556 AC139103.1-201ENST00000534696 1030 ntBASIC2.41□□□□□ -2.02
CCL20P78556 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.41□□□□□ -2.02
CCL20P78556 MTCO3P13-201ENST00000577757 781 ntBASIC2.41□□□□□ -2.02
CCL20P78556 MIR4284-201ENST00000578924 81 ntBASIC2.41□□□□□ -2.02
CCL20P78556 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC2.41□□□□□ -2.02
CCL20P78556 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.41□□□□□ -2.02
CCL20P78556 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.41□□□□□ -2.02
CCL20P78556 MTCO3P22-201ENST00000603219 784 ntBASIC2.41□□□□□ -2.02
CCL20P78556 AL133393.1-201ENST00000603277 287 ntBASIC2.41□□□□□ -2.02
CCL20P78556 AL009028.1-201ENST00000604895 802 ntBASIC2.41□□□□□ -2.02
CCL20P78556 AL359198.2-201ENST00000611836 194 ntBASIC2.41□□□□□ -2.02
CCL20P78556 MIR6716-201ENST00000613413 80 ntBASIC2.41□□□□□ -2.02
CCL20P78556 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.41□□□□□ -2.02
CCL20P78556 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCL20P78556 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCL20P78556 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.4□□□□□ -2.02
CCL20P78556 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.4□□□□□ -2.03
CCL20P78556 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CCL20P78556 RNU4-35P-201ENST00000362588 141 ntBASIC2.4□□□□□ -2.03
CCL20P78556 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CCL20P78556 MIR181A2-201ENST00000384863 110 ntBASIC2.4□□□□□ -2.03
CCL20P78556 MIR7-1-201ENST00000384871 110 ntBASIC2.4□□□□□ -2.03
CCL20P78556 RNU1-101P-201ENST00000391171 127 ntBASIC2.4□□□□□ -2.03
CCL20P78556 AL121972.1-201ENST00000402023 252 ntBASIC2.4□□□□□ -2.03
CCL20P78556 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC2.4□□□□□ -2.03
CCL20P78556 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.4□□□□□ -2.03
CCL20P78556 AL035423.1-201ENST00000420331 213 ntBASIC2.4□□□□□ -2.03
CCL20P78556 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.4□□□□□ -2.03
CCL20P78556 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.4□□□□□ -2.03
CCL20P78556 RPL18P10-201ENST00000425606 538 ntBASIC2.4□□□□□ -2.03
CCL20P78556 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.4□□□□□ -2.03
CCL20P78556 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC2.4□□□□□ -2.03
CCL20P78556 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.4□□□□□ -2.03
CCL20P78556 HSFY6P-201ENST00000445573 403 ntBASIC2.4□□□□□ -2.03
CCL20P78556 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.4□□□□□ -2.03
CCL20P78556 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.4□□□□□ -2.03
CCL20P78556 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.4□□□□□ -2.03
CCL20P78556 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.4□□□□□ -2.03
CCL20P78556 RPS17P11-201ENST00000474297 293 ntBASIC2.4□□□□□ -2.03
CCL20P78556 RPL23AP11-201ENST00000475260 469 ntBASIC2.4□□□□□ -2.03
CCL20P78556 HMGN2P13-201ENST00000476476 274 ntBASIC2.4□□□□□ -2.03
CCL20P78556 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.4□□□□□ -2.03
CCL20P78556 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC2.4□□□□□ -2.03
CCL20P78556 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.4□□□□□ -2.03
CCL20P78556 RGS5-218ENST00000526176 574 ntTSL 4 BASIC2.4□□□□□ -2.03
CCL20P78556 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.4□□□□□ -2.03
CCL20P78556 OR4A45P-201ENST00000529954 901 ntBASIC2.4□□□□□ -2.03
CCL20P78556 AP000857.1-201ENST00000532151 543 ntBASIC2.4□□□□□ -2.03
CCL20P78556 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.4□□□□□ -2.03
CCL20P78556 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.4□□□□□ -2.03
CCL20P78556 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.4□□□□□ -2.03
CCL20P78556 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.4□□□□□ -2.03
CCL20P78556 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms