Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.88□□□□□ -1.79
CCNA1P78396 AC005798.1-201ENST00000513715 387 ntBASIC3.88□□□□□ -1.79
CCNA1P78396 HIGD1AP3-201ENST00000515857 278 ntBASIC3.88□□□□□ -1.79
CCNA1P78396 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.88□□□□□ -1.79
CCNA1P78396 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.88□□□□□ -1.79
CCNA1P78396 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.88□□□□□ -1.79
CCNA1P78396 NOP56P3-201ENST00000549457 385 ntBASIC3.88□□□□□ -1.79
CCNA1P78396 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.88□□□□□ -1.79
CCNA1P78396 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.88□□□□□ -1.79
CCNA1P78396 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.88□□□□□ -1.79
CCNA1P78396 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.88□□□□□ -1.79
CCNA1P78396 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.88□□□□□ -1.79
CCNA1P78396 AC127502.3-201ENST00000636170 1206 ntBASIC3.88□□□□□ -1.79
CCNA1P78396 U6.98-201ENST00000637157 84 ntBASIC3.88□□□□□ -1.79
CCNA1P78396 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.88□□□□□ -1.79
CCNA1P78396 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCNA1P78396 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCNA1P78396 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
CCNA1P78396 AC007342.9-201ENST00000623877 1385 ntBASIC3.88□□□□□ -1.79
CCNA1P78396 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.87□□□□□ -1.79
CCNA1P78396 RNA5SP295-201ENST00000362655 121 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 RN7SKP56-201ENST00000410513 331 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.87□□□□□ -1.79
CCNA1P78396 AC069218.2-201ENST00000411665 344 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.87□□□□□ -1.79
CCNA1P78396 AC007390.1-201ENST00000415722 356 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 MOB1AP1-201ENST00000430903 535 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 SETP5-201ENST00000437270 562 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 AL831737.1-201ENST00000441288 271 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.87□□□□□ -1.79
CCNA1P78396 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.87□□□□□ -1.79
CCNA1P78396 NF1P3-201ENST00000457709 450 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 AC109925.1-201ENST00000478069 331 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
CCNA1P78396 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.87□□□□□ -1.79
CCNA1P78396 AC021678.1-201ENST00000505195 936 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 AC112198.1-201ENST00000505369 1220 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 BTF3L4P4-201ENST00000506381 449 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 RN7SKP83-201ENST00000516512 178 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.87□□□□□ -1.79
CCNA1P78396 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.87□□□□□ -1.79
CCNA1P78396 AC008489.1-201ENST00000524271 483 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 MTND5P21-201ENST00000531961 522 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 DUXAP6-201ENST00000553858 601 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.87□□□□□ -1.79
CCNA1P78396 AC141257.3-201ENST00000572906 215 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.87□□□□□ -1.79
CCNA1P78396 MIR4513-201ENST00000581077 86 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.87□□□□□ -1.79
CCNA1P78396 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.87□□□□□ -1.79
CCNA1P78396 SNRPGP15-201ENST00000600149 222 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 AC011816.2-201ENST00000607089 556 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 MIR486-1-201ENST00000612171 68 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 CR589904.2-201ENST00000612533 440 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.87□□□□□ -1.79
CCNA1P78396 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCNA1P78396 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CCNA1P78396 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.87□□□□□ -1.79
CCNA1P78396 AC091152.2-201ENST00000591628 2569 ntBASIC3.87□□□□□ -1.79
CCNA1P78396 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCNA1P78396 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
CCNA1P78396 NCAPGP1-201ENST00000505112 1814 ntBASIC3.86□□□□□ -1.79
CCNA1P78396 PABPC1P7-201ENST00000413177 1513 ntBASIC3.86□□□□□ -1.79
CCNA1P78396 AC046144.1-201ENST00000478559 1853 ntBASIC3.86□□□□□ -1.79
CCNA1P78396 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCNA1P78396 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CCNA1P78396 HMGN2P8-201ENST00000391458 268 ntBASIC3.86□□□□□ -1.79
CCNA1P78396 GSTA8P-201ENST00000404253 637 ntBASIC3.86□□□□□ -1.79
CCNA1P78396 AL138878.1-201ENST00000405131 347 ntBASIC3.86□□□□□ -1.79
CCNA1P78396 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.86□□□□□ -1.79
CCNA1P78396 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CCNA1P78396 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.86□□□□□ -1.79
CCNA1P78396 AC084357.1-201ENST00000473404 255 ntBASIC3.86□□□□□ -1.79
CCNA1P78396 NPM1P17-201ENST00000479221 602 ntBASIC3.86□□□□□ -1.79
CCNA1P78396 AL049830.2-201ENST00000480072 201 ntBASIC3.86□□□□□ -1.79
CCNA1P78396 RPL7P38-201ENST00000488396 739 ntBASIC3.86□□□□□ -1.79
CCNA1P78396 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.86□□□□□ -1.79
CCNA1P78396 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.86□□□□□ -1.79
CCNA1P78396 RNA5SP341-201ENST00000516261 117 ntBASIC3.86□□□□□ -1.79
CCNA1P78396 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.86□□□□□ -1.79
CCNA1P78396 TRAV11-201ENST00000539512 339 ntBASIC3.86□□□□□ -1.79
CCNA1P78396 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.86□□□□□ -1.79
CCNA1P78396 AC007566.2-201ENST00000603642 413 ntBASIC3.86□□□□□ -1.79
CCNA1P78396 AL162713.1-201ENST00000604480 262 ntBASIC3.86□□□□□ -1.79
CCNA1P78396 AL137843.1-201ENST00000605078 385 ntBASIC3.86□□□□□ -1.79
CCNA1P78396 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.86□□□□□ -1.79
CCNA1P78396 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CCNA1P78396 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.86□□□□□ -1.79
CCNA1P78396 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCNA1P78396 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCNA1P78396 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCNA1P78396 AC138915.3-201ENST00000562908 1389 ntBASIC3.86□□□□□ -1.79
CCNA1P78396 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCNA1P78396 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.86□□□□□ -1.79
CCNA1P78396 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.86□□□□□ -1.79
CCNA1P78396 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
CCNA1P78396 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CCNA1P78396 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
CCNA1P78396 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms