Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.83□□□□□ -1.8
PEX3P56589 CYCSP43-201ENST00000438233 310 ntBASIC3.83□□□□□ -1.8
PEX3P56589 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.83□□□□□ -1.8
PEX3P56589 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.83□□□□□ -1.8
PEX3P56589 MRPL35P4-201ENST00000453682 566 ntBASIC3.83□□□□□ -1.8
PEX3P56589 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.83□□□□□ -1.8
PEX3P56589 RPL7L1P8-201ENST00000469911 741 ntBASIC3.83□□□□□ -1.8
PEX3P56589 AC104689.1-201ENST00000473356 768 ntBASIC3.83□□□□□ -1.8
PEX3P56589 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.83□□□□□ -1.8
PEX3P56589 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.83□□□□□ -1.8
PEX3P56589 AC119751.1-201ENST00000513357 765 ntBASIC3.83□□□□□ -1.8
PEX3P56589 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.83□□□□□ -1.8
PEX3P56589 AC010376.1-201ENST00000522101 334 ntBASIC3.83□□□□□ -1.8
PEX3P56589 COX6B1P6-201ENST00000522347 255 ntBASIC3.83□□□□□ -1.8
PEX3P56589 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PEX3P56589 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.83□□□□□ -1.8
PEX3P56589 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
PEX3P56589 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.83□□□□□ -1.8
PEX3P56589 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.83□□□□□ -1.8
PEX3P56589 MIR4738-201ENST00000579134 87 ntBASIC3.83□□□□□ -1.8
PEX3P56589 VN1R84P-201ENST00000593697 235 ntBASIC3.83□□□□□ -1.8
PEX3P56589 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.83□□□□□ -1.8
PEX3P56589 BNIP3P40-201ENST00000596017 556 ntBASIC3.83□□□□□ -1.8
PEX3P56589 VN1R88P-201ENST00000596787 292 ntBASIC3.83□□□□□ -1.8
PEX3P56589 BNIP3P38-201ENST00000601117 544 ntBASIC3.83□□□□□ -1.8
PEX3P56589 AL022067.1-201ENST00000602426 454 ntBASIC3.83□□□□□ -1.8
PEX3P56589 U7.8-201ENST00000619968 63 ntBASIC3.83□□□□□ -1.8
PEX3P56589 AP003485.1-201ENST00000625093 753 ntBASIC3.83□□□□□ -1.8
PEX3P56589 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PEX3P56589 AL049737.1-201ENST00000413920 1403 ntBASIC3.83□□□□□ -1.8
PEX3P56589 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
PEX3P56589 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PEX3P56589 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.83□□□□□ -1.8
PEX3P56589 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PEX3P56589 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PEX3P56589 AC114546.3-201ENST00000623582 1734 ntBASIC3.82□□□□□ -1.8
PEX3P56589 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.82□□□□□ -1.8
PEX3P56589 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.82□□□□□ -1.8
PEX3P56589 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PEX3P56589 RNA5SP50-201ENST00000363731 107 ntBASIC3.82□□□□□ -1.8
PEX3P56589 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PEX3P56589 AL603865.2-201ENST00000401679 213 ntBASIC3.82□□□□□ -1.8
PEX3P56589 RNU6-77P-201ENST00000410554 91 ntBASIC3.82□□□□□ -1.8
PEX3P56589 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.82□□□□□ -1.8
PEX3P56589 PTP4A1P5-201ENST00000420305 455 ntBASIC3.82□□□□□ -1.8
PEX3P56589 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.82□□□□□ -1.8
PEX3P56589 AC092634.2-201ENST00000428146 1010 ntBASIC3.82□□□□□ -1.8
PEX3P56589 FTH1P6-201ENST00000430768 320 ntBASIC3.82□□□□□ -1.8
PEX3P56589 RPL21P110-201ENST00000433345 446 ntBASIC3.82□□□□□ -1.8
PEX3P56589 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.82□□□□□ -1.8
PEX3P56589 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.82□□□□□ -1.8
PEX3P56589 MTND1P33-201ENST00000446251 917 ntBASIC3.82□□□□□ -1.8
PEX3P56589 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.82□□□□□ -1.8
PEX3P56589 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.82□□□□□ -1.8
PEX3P56589 AC005002.1-201ENST00000447458 540 ntBASIC3.82□□□□□ -1.8
PEX3P56589 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.82□□□□□ -1.8
PEX3P56589 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.82□□□□□ -1.8
PEX3P56589 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.82□□□□□ -1.8
PEX3P56589 RNU6-416P-201ENST00000516265 103 ntBASIC3.82□□□□□ -1.8
PEX3P56589 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.82□□□□□ -1.8
PEX3P56589 DUXAP2-201ENST00000519198 589 ntBASIC3.82□□□□□ -1.8
PEX3P56589 IGJP1-201ENST00000522682 475 ntBASIC3.82□□□□□ -1.8
PEX3P56589 AC124293.1-201ENST00000530034 493 ntBASIC3.82□□□□□ -1.8
PEX3P56589 AP000619.3-201ENST00000535634 1127 ntBASIC3.82□□□□□ -1.8
PEX3P56589 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.82□□□□□ -1.8
PEX3P56589 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.82□□□□□ -1.8
PEX3P56589 CYB5AP5-201ENST00000549779 389 ntBASIC3.82□□□□□ -1.8
PEX3P56589 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.82□□□□□ -1.8
PEX3P56589 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.82□□□□□ -1.8
PEX3P56589 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.82□□□□□ -1.8
PEX3P56589 AC105148.1-201ENST00000604961 409 ntBASIC3.82□□□□□ -1.8
PEX3P56589 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.82□□□□□ -1.8
PEX3P56589 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.82□□□□□ -1.8
PEX3P56589 AC018926.3-201ENST00000618841 406 ntBASIC3.82□□□□□ -1.8
PEX3P56589 AC022149.2-201ENST00000621061 203 ntBASIC3.82□□□□□ -1.8
PEX3P56589 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.82□□□□□ -1.8
PEX3P56589 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
PEX3P56589 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PEX3P56589 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
PEX3P56589 AC119744.1-201ENST00000454746 1715 ntBASIC3.81□□□□□ -1.8
PEX3P56589 MTCO1P14-201ENST00000441695 1559 ntBASIC3.81□□□□□ -1.8
PEX3P56589 MTCO1P12-201ENST00000414273 1543 ntBASIC3.81□□□□□ -1.8
PEX3P56589 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PEX3P56589 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PEX3P56589 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.81□□□□□ -1.8
PEX3P56589 RNU6-549P-201ENST00000384433 107 ntBASIC3.81□□□□□ -1.8
PEX3P56589 MIR183-201ENST00000384958 110 ntBASIC3.81□□□□□ -1.8
PEX3P56589 RPL31P52-201ENST00000407532 367 ntBASIC3.81□□□□□ -1.8
PEX3P56589 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.81□□□□□ -1.8
PEX3P56589 RPL30P2-201ENST00000414021 291 ntBASIC3.81□□□□□ -1.8
PEX3P56589 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.81□□□□□ -1.8
PEX3P56589 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.81□□□□□ -1.8
PEX3P56589 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.81□□□□□ -1.8
PEX3P56589 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.81□□□□□ -1.8
PEX3P56589 AL159987.2-201ENST00000432754 307 ntBASIC3.81□□□□□ -1.8
PEX3P56589 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.81□□□□□ -1.8
PEX3P56589 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.81□□□□□ -1.8
PEX3P56589 CYCSP35-201ENST00000451978 304 ntBASIC3.81□□□□□ -1.8
PEX3P56589 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.81□□□□□ -1.8
PEX3P56589 BX248409.1-201ENST00000455497 255 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 270.1 ms