Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC092326.2-201ENST00000624772 1561 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.37□□□□□ -1.87
PKNOX1P55347 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKNOX1P55347 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKNOX1P55347 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.37□□□□□ -1.87
PKNOX1P55347 SNORA31-201ENST00000362607 130 ntBASIC3.37□□□□□ -1.87
PKNOX1P55347 RNU6-1243P-201ENST00000364028 107 ntBASIC3.37□□□□□ -1.87
PKNOX1P55347 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKNOX1P55347 RNU6-354P-201ENST00000383862 107 ntBASIC3.37□□□□□ -1.87
PKNOX1P55347 RNU6-610P-201ENST00000384264 107 ntBASIC3.37□□□□□ -1.87
PKNOX1P55347 MIR525-201ENST00000384978 85 ntBASIC3.37□□□□□ -1.87
PKNOX1P55347 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.37□□□□□ -1.87
PKNOX1P55347 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKNOX1P55347 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.37□□□□□ -1.87
PKNOX1P55347 FO393414.1-201ENST00000428697 1184 ntBASIC3.37□□□□□ -1.87
PKNOX1P55347 OR51AB1P-201ENST00000429046 620 ntBASIC3.37□□□□□ -1.87
PKNOX1P55347 UBE2V1P1-201ENST00000430836 445 ntBASIC3.37□□□□□ -1.87
PKNOX1P55347 AL590399.6-201ENST00000446396 307 ntBASIC3.37□□□□□ -1.87
PKNOX1P55347 NUTF2P7-201ENST00000453086 375 ntBASIC3.37□□□□□ -1.87
PKNOX1P55347 HMGN1P18-201ENST00000457642 277 ntBASIC3.37□□□□□ -1.87
PKNOX1P55347 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.37□□□□□ -1.87
PKNOX1P55347 OR4R2P-201ENST00000530815 597 ntBASIC3.37□□□□□ -1.87
PKNOX1P55347 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.37□□□□□ -1.87
PKNOX1P55347 AC006518.1-201ENST00000541449 943 ntBASIC3.37□□□□□ -1.87
PKNOX1P55347 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.37□□□□□ -1.87
PKNOX1P55347 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.37□□□□□ -1.87
PKNOX1P55347 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKNOX1P55347 AC011611.5-201ENST00000552477 578 ntBASIC3.37□□□□□ -1.87
PKNOX1P55347 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.37□□□□□ -1.87
PKNOX1P55347 AC006116.10-201ENST00000591836 581 ntBASIC3.37□□□□□ -1.87
PKNOX1P55347 AC011492.1-201ENST00000600023 315 ntBASIC3.37□□□□□ -1.87
PKNOX1P55347 YWHAQP7-201ENST00000603536 658 ntBASIC3.37□□□□□ -1.87
PKNOX1P55347 AC099778.2-201ENST00000610904 211 ntBASIC3.37□□□□□ -1.87
PKNOX1P55347 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.37□□□□□ -1.87
PKNOX1P55347 AC017071.1-201ENST00000564407 2204 ntBASIC3.37□□□□□ -1.87
PKNOX1P55347 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.37□□□□□ -1.87
PKNOX1P55347 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.37□□□□□ -1.87
PKNOX1P55347 AL592494.2-201ENST00000425455 1548 ntBASIC3.37□□□□□ -1.87
PKNOX1P55347 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKNOX1P55347 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKNOX1P55347 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKNOX1P55347 AC073055.1-201ENST00000456901 1621 ntBASIC3.37□□□□□ -1.87
PKNOX1P55347 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.37□□□□□ -1.87
PKNOX1P55347 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKNOX1P55347 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKNOX1P55347 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKNOX1P55347 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKNOX1P55347 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKNOX1P55347 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.36□□□□□ -1.87
PKNOX1P55347 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKNOX1P55347 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKNOX1P55347 RNA5SP189-201ENST00000364920 115 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PKNOX1P55347 RNU6-932P-201ENST00000391108 106 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 SKINT1L-201ENST00000401057 817 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 RSL24D1P1-201ENST00000404972 493 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.36□□□□□ -1.87
PKNOX1P55347 EI24P1-201ENST00000416584 867 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 AC246680.2-201ENST00000422106 389 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.36□□□□□ -1.87
PKNOX1P55347 ARL4AP4-201ENST00000434170 518 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 CKS1BP5-201ENST00000434172 273 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.36□□□□□ -1.87
PKNOX1P55347 SETP5-201ENST00000437270 562 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 CYCSP43-201ENST00000438233 310 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.36□□□□□ -1.87
PKNOX1P55347 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.36□□□□□ -1.87
PKNOX1P55347 RPS20P32-201ENST00000456044 356 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 CDC42P1-201ENST00000456658 548 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKNOX1P55347 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKNOX1P55347 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKNOX1P55347 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 AC093331.1-201ENST00000521474 169 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 HIGD1AP6-201ENST00000521833 279 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.36□□□□□ -1.87
PKNOX1P55347 AC124293.1-201ENST00000530034 493 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKNOX1P55347 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.36□□□□□ -1.87
PKNOX1P55347 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.36□□□□□ -1.87
PKNOX1P55347 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.36□□□□□ -1.87
PKNOX1P55347 MTCYBP28-201ENST00000566728 1132 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.36□□□□□ -1.87
PKNOX1P55347 MIR4789-201ENST00000577469 82 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 AC010928.3-201ENST00000587712 541 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.36□□□□□ -1.87
PKNOX1P55347 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKNOX1P55347 AL020997.3-201ENST00000602843 359 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 AC010591.1-201ENST00000603941 649 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.36□□□□□ -1.87
PKNOX1P55347 AP005229.2-201ENST00000609980 697 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 MIR7851-201ENST00000610611 160 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 U4.6-201ENST00000621618 127 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.36□□□□□ -1.87
PKNOX1P55347 AC106730.3-201ENST00000624568 641 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.36□□□□□ -1.87
PKNOX1P55347 MTND5P28-201ENST00000438005 1594 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.36□□□□□ -1.87
PKNOX1P55347 AC005183.1-201ENST00000603687 1979 ntBASIC3.36□□□□□ -1.87
PKNOX1P55347 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms