Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 UBE2D3P1-201ENST00000436669 444 ntBASIC3.79□□□□□ -1.8
CDH11P55287 MTND5P2-201ENST00000442927 1142 ntBASIC3.79□□□□□ -1.8
CDH11P55287 Z83846.1-201ENST00000446798 265 ntBASIC3.79□□□□□ -1.8
CDH11P55287 OR6K5P-201ENST00000447050 945 ntBASIC3.79□□□□□ -1.8
CDH11P55287 HMGB3P22-202ENST00000451823 572 ntBASIC3.79□□□□□ -1.8
CDH11P55287 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.79□□□□□ -1.8
CDH11P55287 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CDH11P55287 AC105137.1-201ENST00000484355 562 ntBASIC3.79□□□□□ -1.8
CDH11P55287 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
CDH11P55287 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH11P55287 AC108475.1-201ENST00000507880 950 ntBASIC3.79□□□□□ -1.8
CDH11P55287 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CDH11P55287 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.79□□□□□ -1.8
CDH11P55287 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDH11P55287 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.79□□□□□ -1.8
CDH11P55287 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH11P55287 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CDH11P55287 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.79□□□□□ -1.8
CDH11P55287 AC125611.1-201ENST00000549563 229 ntBASIC3.79□□□□□ -1.8
CDH11P55287 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH11P55287 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.79□□□□□ -1.8
CDH11P55287 AC002400.1-201ENST00000569310 726 ntBASIC3.79□□□□□ -1.8
CDH11P55287 AC005412.1-201ENST00000580812 1049 ntBASIC3.79□□□□□ -1.8
CDH11P55287 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH11P55287 AC107982.3-201ENST00000584957 985 ntBASIC3.79□□□□□ -1.8
CDH11P55287 VN1R90P-201ENST00000595717 726 ntBASIC3.79□□□□□ -1.8
CDH11P55287 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH11P55287 AL031281.1-201ENST00000604049 488 ntBASIC3.79□□□□□ -1.8
CDH11P55287 AC110741.2-201ENST00000605278 268 ntBASIC3.79□□□□□ -1.8
CDH11P55287 AC113194.1-201ENST00000606037 500 ntBASIC3.79□□□□□ -1.8
CDH11P55287 AP001521.1-201ENST00000609150 300 ntBASIC3.79□□□□□ -1.8
CDH11P55287 AL445567.2-201ENST00000618935 498 ntBASIC3.79□□□□□ -1.8
CDH11P55287 AC069209.1-201ENST00000619282 651 ntBASIC3.79□□□□□ -1.8
CDH11P55287 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDH11P55287 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDH11P55287 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDH11P55287 CDR1-202ENST00000625883 1485 ntBASIC3.79□□□□□ -1.8
CDH11P55287 ERCC6-202ENST00000374127 1782 ntBASIC3.79□□□□□ -1.8
CDH11P55287 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH11P55287 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
CDH11P55287 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CDH11P55287 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDH11P55287 AL592437.2-201ENST00000421655 2434 ntBASIC3.78□□□□□ -1.8
CDH11P55287 Y_RNA.169-201ENST00000363745 96 ntBASIC3.78□□□□□ -1.8
CDH11P55287 RNA5SP366-201ENST00000365454 123 ntBASIC3.78□□□□□ -1.8
CDH11P55287 RNU6-657P-201ENST00000383904 107 ntBASIC3.78□□□□□ -1.8
CDH11P55287 RNU5A-2P-201ENST00000384337 116 ntBASIC3.78□□□□□ -1.8
CDH11P55287 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.78□□□□□ -1.8
CDH11P55287 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDH11P55287 AL356131.1-201ENST00000405826 414 ntBASIC3.78□□□□□ -1.8
CDH11P55287 MIR1193-201ENST00000408109 78 ntBASIC3.78□□□□□ -1.8
CDH11P55287 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.78□□□□□ -1.8
CDH11P55287 TXNL1P1-201ENST00000429528 554 ntBASIC3.78□□□□□ -1.8
CDH11P55287 RPS27AP12-201ENST00000429552 465 ntBASIC3.78□□□□□ -1.8
CDH11P55287 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDH11P55287 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH11P55287 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH11P55287 AL445567.1-201ENST00000439121 144 ntBASIC3.78□□□□□ -1.8
CDH11P55287 RPL23AP52-201ENST00000439311 478 ntBASIC3.78□□□□□ -1.8
CDH11P55287 MTND2P20-201ENST00000440805 661 ntBASIC3.78□□□□□ -1.8
CDH11P55287 RPS26P56-201ENST00000444468 240 ntBASIC3.78□□□□□ -1.8
CDH11P55287 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH11P55287 SLC31A1P1-201ENST00000451221 567 ntBASIC3.78□□□□□ -1.8
CDH11P55287 FABP3P2-201ENST00000453169 399 ntBASIC3.78□□□□□ -1.8
CDH11P55287 AC009963.2-201ENST00000453431 138 ntBASIC3.78□□□□□ -1.8
CDH11P55287 AL109741.2-201ENST00000455561 343 ntBASIC3.78□□□□□ -1.8
CDH11P55287 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH11P55287 RPL7P19-201ENST00000469948 618 ntBASIC3.78□□□□□ -1.8
CDH11P55287 MTND6P6-201ENST00000478031 263 ntBASIC3.78□□□□□ -1.8
CDH11P55287 RPS29P19-201ENST00000479709 171 ntBASIC3.78□□□□□ -1.8
CDH11P55287 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.78□□□□□ -1.8
CDH11P55287 AC106872.2-201ENST00000494303 480 ntBASIC3.78□□□□□ -1.8
CDH11P55287 AC147055.4-201ENST00000504399 745 ntBASIC3.78□□□□□ -1.8
CDH11P55287 HMGB1P28-201ENST00000507778 552 ntBASIC3.78□□□□□ -1.8
CDH11P55287 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.78□□□□□ -1.8
CDH11P55287 AC110792.2-201ENST00000510278 224 ntBASIC3.78□□□□□ -1.8
CDH11P55287 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDH11P55287 MTCYBP37-201ENST00000510642 1133 ntBASIC3.78□□□□□ -1.8
CDH11P55287 MTCO1P30-201ENST00000515244 580 ntBASIC3.78□□□□□ -1.8
CDH11P55287 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.78□□□□□ -1.8
CDH11P55287 MIR2116-201ENST00000517221 80 ntBASIC3.78□□□□□ -1.8
CDH11P55287 IGKV2-38-201ENST00000517443 247 ntBASIC3.78□□□□□ -1.8
CDH11P55287 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH11P55287 CYCSP29-201ENST00000533731 318 ntBASIC3.78□□□□□ -1.8
CDH11P55287 AC008015.1-201ENST00000555505 465 ntBASIC3.78□□□□□ -1.8
CDH11P55287 TVP23BP1-201ENST00000557500 617 ntBASIC3.78□□□□□ -1.8
CDH11P55287 SULT1C2P1-202ENST00000562418 459 ntBASIC3.78□□□□□ -1.8
CDH11P55287 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH11P55287 AC135628.1-201ENST00000568867 534 ntBASIC3.78□□□□□ -1.8
CDH11P55287 AC013444.2-201ENST00000603317 787 ntBASIC3.78□□□□□ -1.8
CDH11P55287 HSPE1P14-201ENST00000605812 302 ntBASIC3.78□□□□□ -1.8
CDH11P55287 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH11P55287 AC128687.2-201ENST00000609657 566 ntBASIC3.78□□□□□ -1.8
CDH11P55287 AL392048.1-201ENST00000613946 534 ntBASIC3.78□□□□□ -1.8
CDH11P55287 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH11P55287 MIR3653-201ENST00000625572 110 ntBASIC3.78□□□□□ -1.8
CDH11P55287 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH11P55287 AC008013.2-202ENST00000637965 364 ntBASIC3.78□□□□□ -1.8
CDH11P55287 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDH11P55287 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms