Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MIR708-201ENST00000390708 88 ntBASIC3.37□□□□□ -1.87
NUP98P52948 AC004987.3-201ENST00000413879 771 ntBASIC3.37□□□□□ -1.87
NUP98P52948 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.37□□□□□ -1.87
NUP98P52948 NECAP1P2-201ENST00000455668 727 ntBASIC3.37□□□□□ -1.87
NUP98P52948 AC010486.1-201ENST00000511793 424 ntBASIC3.37□□□□□ -1.87
NUP98P52948 AC096725.1-201ENST00000514266 313 ntBASIC3.37□□□□□ -1.87
NUP98P52948 RNA5SP148-201ENST00000516527 94 ntBASIC3.37□□□□□ -1.87
NUP98P52948 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.37□□□□□ -1.87
NUP98P52948 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.37□□□□□ -1.87
NUP98P52948 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.37□□□□□ -1.87
NUP98P52948 AC106734.1-201ENST00000568646 663 ntBASIC3.37□□□□□ -1.87
NUP98P52948 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NUP98P52948 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.37□□□□□ -1.87
NUP98P52948 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NUP98P52948 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
NUP98P52948 AC046144.1-201ENST00000478559 1853 ntBASIC3.36□□□□□ -1.87
NUP98P52948 AC109315.1-201ENST00000584143 1347 ntBASIC3.36□□□□□ -1.87
NUP98P52948 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.36□□□□□ -1.87
NUP98P52948 OR52B1P-201ENST00000316506 909 ntBASIC3.36□□□□□ -1.87
NUP98P52948 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
NUP98P52948 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.36□□□□□ -1.87
NUP98P52948 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.36□□□□□ -1.87
NUP98P52948 AL035407.1-201ENST00000429211 571 ntBASIC3.36□□□□□ -1.87
NUP98P52948 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
NUP98P52948 AL121890.1-201ENST00000435457 205 ntBASIC3.36□□□□□ -1.87
NUP98P52948 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.36□□□□□ -1.87
NUP98P52948 RPL23AP31-201ENST00000456160 467 ntBASIC3.36□□□□□ -1.87
NUP98P52948 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
NUP98P52948 HSPE1P6-201ENST00000479457 291 ntBASIC3.36□□□□□ -1.87
NUP98P52948 AP004217.1-201ENST00000480579 346 ntBASIC3.36□□□□□ -1.87
NUP98P52948 AC093278.1-201ENST00000494700 600 ntBASIC3.36□□□□□ -1.87
NUP98P52948 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
NUP98P52948 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.36□□□□□ -1.87
NUP98P52948 AC107918.3-201ENST00000533272 382 ntBASIC3.36□□□□□ -1.87
NUP98P52948 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.36□□□□□ -1.87
NUP98P52948 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.36□□□□□ -1.87
NUP98P52948 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NUP98P52948 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
NUP98P52948 AC005183.1-201ENST00000603687 1979 ntBASIC3.36□□□□□ -1.87
NUP98P52948 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NUP98P52948 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NUP98P52948 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.35□□□□□ -1.87
NUP98P52948 AL139413.1-201ENST00000421309 217 ntBASIC3.35□□□□□ -1.87
NUP98P52948 RPL21P112-201ENST00000434403 463 ntBASIC3.35□□□□□ -1.87
NUP98P52948 MTND6P18-201ENST00000439477 513 ntBASIC3.35□□□□□ -1.87
NUP98P52948 FTH1P25-201ENST00000447665 469 ntBASIC3.35□□□□□ -1.87
NUP98P52948 AC005921.1-201ENST00000510589 286 ntBASIC3.35□□□□□ -1.87
NUP98P52948 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.35□□□□□ -1.87
NUP98P52948 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.35□□□□□ -1.87
NUP98P52948 ZNF861P-201ENST00000588126 639 ntBASIC3.35□□□□□ -1.87
NUP98P52948 AC011492.1-201ENST00000600023 315 ntBASIC3.35□□□□□ -1.87
NUP98P52948 AL353743.4-201ENST00000422653 1547 ntBASIC3.35□□□□□ -1.87
NUP98P52948 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.35□□□□□ -1.87
NUP98P52948 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NUP98P52948 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
NUP98P52948 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
NUP98P52948 AL450326.2-201ENST00000421913 1962 ntBASIC3.35□□□□□ -1.87
NUP98P52948 AC233263.6-201ENST00000631132 1963 ntBASIC3.35□□□□□ -1.87
NUP98P52948 RPL5P19-201ENST00000404228 893 ntBASIC3.35□□□□□ -1.87
NUP98P52948 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.35□□□□□ -1.87
NUP98P52948 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.35□□□□□ -1.87
NUP98P52948 TXNP1-201ENST00000441872 371 ntBASIC3.35□□□□□ -1.87
NUP98P52948 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.35□□□□□ -1.87
NUP98P52948 DYNLL1P6-201ENST00000503440 264 ntBASIC3.35□□□□□ -1.87
NUP98P52948 AC092851.1-201ENST00000535964 478 ntBASIC3.35□□□□□ -1.87
NUP98P52948 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.35□□□□□ -1.87
NUP98P52948 EIF5A2P1-201ENST00000564027 460 ntBASIC3.35□□□□□ -1.87
NUP98P52948 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.35□□□□□ -1.87
NUP98P52948 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.35□□□□□ -1.87
NUP98P52948 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.35□□□□□ -1.87
NUP98P52948 AL020991.1-201ENST00000612314 373 ntBASIC3.35□□□□□ -1.87
NUP98P52948 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.35□□□□□ -1.87
NUP98P52948 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.35□□□□□ -1.87
NUP98P52948 NEAT1-202ENST00000501122 22743 ntBASIC3.35□□□□□ -1.87
NUP98P52948 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NUP98P52948 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
NUP98P52948 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NUP98P52948 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NUP98P52948 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NUP98P52948 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
NUP98P52948 RNA5SP502-201ENST00000362694 119 ntBASIC3.34□□□□□ -1.87
NUP98P52948 AC019155.1-201ENST00000382242 574 ntBASIC3.34□□□□□ -1.87
NUP98P52948 AL589994.1-201ENST00000404962 340 ntBASIC3.34□□□□□ -1.87
NUP98P52948 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.34□□□□□ -1.87
NUP98P52948 AC104687.1-201ENST00000485829 412 ntBASIC3.34□□□□□ -1.87
NUP98P52948 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.34□□□□□ -1.87
NUP98P52948 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.34□□□□□ -1.87
NUP98P52948 AP003122.3-201ENST00000526316 255 ntBASIC3.34□□□□□ -1.87
NUP98P52948 CD24P2-201ENST00000565486 219 ntBASIC3.34□□□□□ -1.87
NUP98P52948 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.34□□□□□ -1.87
NUP98P52948 AC064859.1-201ENST00000624741 174 ntBASIC3.34□□□□□ -1.87
NUP98P52948 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
NUP98P52948 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
NUP98P52948 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
NUP98P52948 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.34□□□□□ -1.88
NUP98P52948 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.88
NUP98P52948 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NUP98P52948 SNORD62.1-201ENST00000362541 86 ntBASIC3.33□□□□□ -1.88
NUP98P52948 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.33□□□□□ -1.88
NUP98P52948 AC016687.1-201ENST00000482574 353 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms