Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 C2orf27A-204ENST00000623058 969 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 AC068724.3-201ENST00000625906 87 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLCNKAP51800 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.11□□□□□ -1.75
CLCNKAP51800 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLCNKAP51800 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLCNKAP51800 MTND5P31-201ENST00000419366 1374 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 DBF4P1-201ENST00000412976 1892 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.11□□□□□ -1.75
CLCNKAP51800 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLCNKAP51800 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.11□□□□□ -1.75
CLCNKAP51800 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLCNKAP51800 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLCNKAP51800 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CLCNKAP51800 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLCNKAP51800 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.1□□□□□ -1.75
CLCNKAP51800 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLCNKAP51800 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLCNKAP51800 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLCNKAP51800 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLCNKAP51800 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLCNKAP51800 RNU6-621P-201ENST00000364752 109 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 Y_RNA.311-201ENST00000365068 96 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLCNKAP51800 MTCO3P31-201ENST00000405526 789 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 VN1R8P-201ENST00000407739 893 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 MIR1302-8-201ENST00000408342 128 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 AL356095.1-201ENST00000417217 199 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCNKAP51800 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCNKAP51800 MTCO3P1-205ENST00000422088 832 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.1□□□□□ -1.75
CLCNKAP51800 AC092832.1-201ENST00000422934 400 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 AL365203.2-201ENST00000423444 196 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLCNKAP51800 AC092017.2-201ENST00000427600 362 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 FTH1P6-201ENST00000430768 320 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 PRELID3BP10-201ENST00000431957 584 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 RPS25P9-201ENST00000435591 252 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCNKAP51800 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.1□□□□□ -1.75
CLCNKAP51800 MTCYBP3-201ENST00000445588 1137 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 RPL5P32-201ENST00000454085 879 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCNKAP51800 LINC00888-204ENST00000487386 421 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 HSPE1P23-201ENST00000509838 286 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 AC110792.2-201ENST00000510278 224 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 MTCO1P35-201ENST00000515270 228 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 RN7SKP96-201ENST00000516948 297 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCNKAP51800 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCNKAP51800 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.1□□□□□ -1.75
CLCNKAP51800 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCNKAP51800 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLCNKAP51800 TRAV15-201ENST00000556680 249 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 AC022655.2-201ENST00000577280 318 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCNKAP51800 VN1R90P-201ENST00000595717 726 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 AC010620.1-201ENST00000601088 1102 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.1□□□□□ -1.75
CLCNKAP51800 AL358072.1-201ENST00000604156 575 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 AC121247.2-201ENST00000604776 136 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 RNA5SP108-201ENST00000605921 117 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 AC080013.6-201ENST00000606185 215 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 AC072039.2-201ENST00000608883 439 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 AC005332.6-201ENST00000613178 446 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 AL392048.1-201ENST00000613946 534 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 AL512506.2-201ENST00000624472 458 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 RNA5SP196-201ENST00000625967 102 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLCNKAP51800 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CLCNKAP51800 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLCNKAP51800 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLCNKAP51800 MAPK10-253ENST00000641010 4072 ntBASIC4.1□□□□□ -1.75
CLCNKAP51800 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.09□□□□□ -1.75
CLCNKAP51800 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CLCNKAP51800 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
CLCNKAP51800 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CLCNKAP51800 RNA5SP391-201ENST00000363456 119 ntBASIC4.09□□□□□ -1.75
CLCNKAP51800 SNORD74.4-201ENST00000364129 80 ntBASIC4.09□□□□□ -1.75
CLCNKAP51800 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CLCNKAP51800 RNU6-444P-201ENST00000383988 108 ntBASIC4.09□□□□□ -1.75
CLCNKAP51800 RNU6-1200P-201ENST00000384162 107 ntBASIC4.09□□□□□ -1.75
CLCNKAP51800 RNU1-13P-201ENST00000384499 162 ntBASIC4.09□□□□□ -1.75
CLCNKAP51800 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CLCNKAP51800 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.09□□□□□ -1.75
CLCNKAP51800 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.09□□□□□ -1.75
CLCNKAP51800 AC233981.1-201ENST00000423224 461 ntBASIC4.09□□□□□ -1.75
CLCNKAP51800 MTND4P20-201ENST00000424125 869 ntBASIC4.09□□□□□ -1.75
CLCNKAP51800 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.09□□□□□ -1.75
CLCNKAP51800 AL591503.2-201ENST00000442314 1005 ntBASIC4.09□□□□□ -1.75
CLCNKAP51800 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.09□□□□□ -1.75
CLCNKAP51800 AC010468.1-201ENST00000461022 817 ntBASIC4.09□□□□□ -1.75
CLCNKAP51800 RPF2P2-201ENST00000504693 896 ntBASIC4.09□□□□□ -1.75
CLCNKAP51800 SNX5P1-201ENST00000505757 1041 ntBASIC4.09□□□□□ -1.75
CLCNKAP51800 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.09□□□□□ -1.75
CLCNKAP51800 RNU6-488P-201ENST00000515918 99 ntBASIC4.09□□□□□ -1.75
CLCNKAP51800 RNY4P37-201ENST00000516225 96 ntBASIC4.09□□□□□ -1.75
CLCNKAP51800 RNU6-232P-201ENST00000517144 64 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms