Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.93□□□□□ -1.94
HTTP42858 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HTTP42858 NF1P10-201ENST00000613227 742 ntBASIC2.93□□□□□ -1.94
HTTP42858 Z82217.1-201ENST00000625157 8149 ntBASIC2.93□□□□□ -1.94
HTTP42858 RPL7P52-201ENST00000449200 742 ntBASIC2.93□□□□□ -1.94
HTTP42858 MTCYBP14-201ENST00000457471 715 ntBASIC2.93□□□□□ -1.94
HTTP42858 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.93□□□□□ -1.94
HTTP42858 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HTTP42858 AL391156.1-201ENST00000554965 554 ntBASIC2.93□□□□□ -1.94
HTTP42858 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HTTP42858 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC2.92□□□□□ -1.94
HTTP42858 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HTTP42858 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.92□□□□□ -1.94
HTTP42858 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HTTP42858 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HTTP42858 Y_RNA.540-201ENST00000384638 111 ntBASIC2.92□□□□□ -1.94
HTTP42858 RPLP0P7-201ENST00000416050 667 ntBASIC2.92□□□□□ -1.94
HTTP42858 AC112220.1-201ENST00000434628 355 ntBASIC2.92□□□□□ -1.94
HTTP42858 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
HTTP42858 HMGB1P48-201ENST00000446155 598 ntBASIC2.92□□□□□ -1.94
HTTP42858 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC2.92□□□□□ -1.94
HTTP42858 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.92□□□□□ -1.94
HTTP42858 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HTTP42858 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HTTP42858 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HTTP42858 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HTTP42858 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HTTP42858 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.92□□□□□ -1.94
HTTP42858 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.92□□□□□ -1.94
HTTP42858 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
HTTP42858 AC003982.1-202ENST00000469928 248 ntBASIC2.92□□□□□ -1.94
HTTP42858 OR4K7P-201ENST00000580232 945 ntBASIC2.92□□□□□ -1.94
HTTP42858 AL355493.4-201ENST00000618530 292 ntBASIC2.92□□□□□ -1.94
HTTP42858 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
HTTP42858 AL138820.1-201ENST00000617901 5305 ntBASIC2.92□□□□□ -1.94
HTTP42858 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HTTP42858 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HTTP42858 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.91□□□□□ -1.94
HTTP42858 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
HTTP42858 AC146507.2-201ENST00000460608 476 ntBASIC2.91□□□□□ -1.94
HTTP42858 TRBV1-201ENST00000476502 284 ntBASIC2.91□□□□□ -1.94
HTTP42858 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.91□□□□□ -1.94
HTTP42858 AC108471.1-201ENST00000513977 287 ntBASIC2.91□□□□□ -1.94
HTTP42858 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.91□□□□□ -1.94
HTTP42858 AL353997.5-201ENST00000618886 171 ntBASIC2.91□□□□□ -1.94
HTTP42858 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HTTP42858 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
HTTP42858 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC2.91□□□□□ -1.94
HTTP42858 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HTTP42858 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HTTP42858 SNORA64-201ENST00000384674 134 ntBASIC2.91□□□□□ -1.94
HTTP42858 AC018634.1-201ENST00000437554 401 ntBASIC2.91□□□□□ -1.94
HTTP42858 MIR8070-201ENST00000616510 88 ntBASIC2.91□□□□□ -1.94
HTTP42858 AL160275.2-201ENST00000412010 394 ntBASIC2.9□□□□□ -1.94
HTTP42858 RANP7-201ENST00000418085 644 ntBASIC2.9□□□□□ -1.94
HTTP42858 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
HTTP42858 DPH3P2-201ENST00000422618 250 ntBASIC2.9□□□□□ -1.94
HTTP42858 RPS20P5-201ENST00000434808 360 ntBASIC2.9□□□□□ -1.94
HTTP42858 OR6K1P-201ENST00000456766 971 ntBASIC2.9□□□□□ -1.94
HTTP42858 HMGN1P18-201ENST00000457642 277 ntBASIC2.9□□□□□ -1.94
HTTP42858 Z82195.1-201ENST00000604558 398 ntBASIC2.9□□□□□ -1.94
HTTP42858 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC2.9□□□□□ -1.94
HTTP42858 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.9□□□□□ -1.94
HTTP42858 OR4G2P-202ENST00000641004 1759 ntBASIC2.9□□□□□ -1.94
HTTP42858 U3.6-201ENST00000363622 211 ntBASIC2.9□□□□□ -1.95
HTTP42858 AC008716.1-201ENST00000511084 513 ntBASIC2.9□□□□□ -1.95
HTTP42858 RNA5SP217-201ENST00000515959 91 ntBASIC2.9□□□□□ -1.95
HTTP42858 NARSP2-201ENST00000518524 679 ntBASIC2.9□□□□□ -1.95
HTTP42858 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC2.9□□□□□ -1.95
HTTP42858 AC007423.1-201ENST00000605009 627 ntBASIC2.9□□□□□ -1.95
HTTP42858 AL136981.2-201ENST00000617319 734 ntBASIC2.9□□□□□ -1.95
HTTP42858 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HTTP42858 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HTTP42858 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
HTTP42858 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HTTP42858 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HTTP42858 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
HTTP42858 Y_RNA.140-201ENST00000363474 103 ntBASIC2.9□□□□□ -1.95
HTTP42858 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
HTTP42858 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.9□□□□□ -1.95
HTTP42858 ISCA1P3-201ENST00000577104 373 ntBASIC2.9□□□□□ -1.95
HTTP42858 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.9□□□□□ -1.95
HTTP42858 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HTTP42858 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HTTP42858 SAGE4P-201ENST00000442271 3381 ntBASIC2.89□□□□□ -1.95
HTTP42858 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.89□□□□□ -1.95
HTTP42858 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
HTTP42858 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HTTP42858 OR9N1P-201ENST00000491296 333 ntBASIC2.89□□□□□ -1.95
HTTP42858 OR5H3P-201ENST00000502817 919 ntBASIC2.89□□□□□ -1.95
HTTP42858 ARL2BPP6-201ENST00000512757 439 ntBASIC2.89□□□□□ -1.95
HTTP42858 RN7SKP82-201ENST00000516786 223 ntBASIC2.89□□□□□ -1.95
HTTP42858 AC009318.2-201ENST00000610917 651 ntBASIC2.89□□□□□ -1.95
HTTP42858 AC009237.17-201ENST00000618111 748 ntBASIC2.89□□□□□ -1.95
HTTP42858 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.89□□□□□ -1.95
HTTP42858 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HTTP42858 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HTTP42858 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HTTP42858 SNORD56.3-201ENST00000363507 71 ntBASIC2.89□□□□□ -1.95
HTTP42858 AL513043.1-201ENST00000439124 535 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms