Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RNA5SP519-201ENST00000516480 119 ntBASIC4.22□□□□□ -1.73
HADHAP40939 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.22□□□□□ -1.73
HADHAP40939 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.22□□□□□ -1.73
HADHAP40939 NBEAP1-201ENST00000554452 979 ntBASIC4.22□□□□□ -1.73
HADHAP40939 TVP23BP1-201ENST00000557500 617 ntBASIC4.22□□□□□ -1.73
HADHAP40939 AGGF1P5-201ENST00000567900 919 ntBASIC4.22□□□□□ -1.73
HADHAP40939 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.22□□□□□ -1.73
HADHAP40939 MIR3939-201ENST00000582614 106 ntBASIC4.22□□□□□ -1.73
HADHAP40939 BNIP3P24-201ENST00000593398 557 ntBASIC4.22□□□□□ -1.73
HADHAP40939 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.22□□□□□ -1.73
HADHAP40939 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HADHAP40939 AC092184.1-201ENST00000625042 715 ntBASIC4.22□□□□□ -1.73
HADHAP40939 CYP3A51P-201ENST00000633513 256 ntBASIC4.22□□□□□ -1.73
HADHAP40939 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HADHAP40939 AF001550.2-201ENST00000636643 217 ntBASIC4.22□□□□□ -1.73
HADHAP40939 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HADHAP40939 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.22□□□□□ -1.73
HADHAP40939 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
HADHAP40939 AL031985.3-201ENST00000565390 2449 ntBASIC4.22□□□□□ -1.73
HADHAP40939 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HADHAP40939 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
HADHAP40939 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.21□□□□□ -1.74
HADHAP40939 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
HADHAP40939 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HADHAP40939 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HADHAP40939 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HADHAP40939 SNORA31-201ENST00000362607 130 ntBASIC4.21□□□□□ -1.74
HADHAP40939 RNA5SP189-201ENST00000364920 115 ntBASIC4.21□□□□□ -1.74
HADHAP40939 RNU6-657P-201ENST00000383904 107 ntBASIC4.21□□□□□ -1.74
HADHAP40939 RNU6-1122P-201ENST00000384449 107 ntBASIC4.21□□□□□ -1.74
HADHAP40939 MTND4LP20-201ENST00000402379 270 ntBASIC4.21□□□□□ -1.74
HADHAP40939 RNA5SP56-201ENST00000410277 118 ntBASIC4.21□□□□□ -1.74
HADHAP40939 RN7SKP182-201ENST00000410772 298 ntBASIC4.21□□□□□ -1.74
HADHAP40939 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.21□□□□□ -1.74
HADHAP40939 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HADHAP40939 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.21□□□□□ -1.74
HADHAP40939 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HADHAP40939 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.21□□□□□ -1.74
HADHAP40939 RPL23AP74-201ENST00000437246 471 ntBASIC4.21□□□□□ -1.74
HADHAP40939 AL138799.3-201ENST00000438968 350 ntBASIC4.21□□□□□ -1.74
HADHAP40939 AC092427.1-201ENST00000439177 601 ntBASIC4.21□□□□□ -1.74
HADHAP40939 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.21□□□□□ -1.74
HADHAP40939 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.21□□□□□ -1.74
HADHAP40939 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.21□□□□□ -1.74
HADHAP40939 AP001086.1-201ENST00000494882 321 ntBASIC4.21□□□□□ -1.74
HADHAP40939 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.21□□□□□ -1.74
HADHAP40939 AC025554.1-201ENST00000505641 188 ntBASIC4.21□□□□□ -1.74
HADHAP40939 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.21□□□□□ -1.74
HADHAP40939 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HADHAP40939 IGKV2D-36-201ENST00000518643 226 ntBASIC4.21□□□□□ -1.74
HADHAP40939 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.21□□□□□ -1.74
HADHAP40939 AC107954.1-201ENST00000565906 727 ntBASIC4.21□□□□□ -1.74
HADHAP40939 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.21□□□□□ -1.74
HADHAP40939 MIR3138-201ENST00000585238 82 ntBASIC4.21□□□□□ -1.74
HADHAP40939 AC010928.3-201ENST00000587712 541 ntBASIC4.21□□□□□ -1.74
HADHAP40939 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.21□□□□□ -1.74
HADHAP40939 IPO5P1-202ENST00000600039 287 ntBASIC4.21□□□□□ -1.74
HADHAP40939 AC025588.3-201ENST00000604182 274 ntBASIC4.21□□□□□ -1.74
HADHAP40939 AC012603.1-201ENST00000606424 528 ntBASIC4.21□□□□□ -1.74
HADHAP40939 AC023043.4-201ENST00000612081 449 ntBASIC4.21□□□□□ -1.74
HADHAP40939 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
HADHAP40939 AC114781.5-201ENST00000615297 108 ntBASIC4.21□□□□□ -1.74
HADHAP40939 AC073968.1-201ENST00000618594 637 ntBASIC4.21□□□□□ -1.74
HADHAP40939 AC013470.4-201ENST00000619978 986 ntBASIC4.21□□□□□ -1.74
HADHAP40939 MAPK10-373ENST00000641983 6772 ntBASIC4.21□□□□□ -1.74
HADHAP40939 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.21□□□□□ -1.74
HADHAP40939 AL390862.1-201ENST00000635467 1469 ntBASIC4.21□□□□□ -1.74
HADHAP40939 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
HADHAP40939 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HADHAP40939 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HADHAP40939 AL157700.1-201ENST00000561973 1432 ntBASIC4.21□□□□□ -1.74
HADHAP40939 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
HADHAP40939 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HADHAP40939 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HADHAP40939 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.2□□□□□ -1.74
HADHAP40939 EI24P1-201ENST00000416584 867 ntBASIC4.2□□□□□ -1.74
HADHAP40939 CYP4F29P-201ENST00000420685 446 ntBASIC4.2□□□□□ -1.74
HADHAP40939 AL391219.1-201ENST00000422570 483 ntBASIC4.2□□□□□ -1.74
HADHAP40939 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.2□□□□□ -1.74
HADHAP40939 MTCO2P17-201ENST00000424336 677 ntBASIC4.2□□□□□ -1.74
HADHAP40939 AC004975.1-201ENST00000428733 208 ntBASIC4.2□□□□□ -1.74
HADHAP40939 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.2□□□□□ -1.74
HADHAP40939 MTND4P6-201ENST00000438297 472 ntBASIC4.2□□□□□ -1.74
HADHAP40939 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.2□□□□□ -1.74
HADHAP40939 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.2□□□□□ -1.74
HADHAP40939 RPL21P134-201ENST00000453468 483 ntBASIC4.2□□□□□ -1.74
HADHAP40939 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.2□□□□□ -1.74
HADHAP40939 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.2□□□□□ -1.74
HADHAP40939 snoU13.3-201ENST00000459441 104 ntBASIC4.2□□□□□ -1.74
HADHAP40939 RPS26P15-201ENST00000488067 348 ntBASIC4.2□□□□□ -1.74
HADHAP40939 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.2□□□□□ -1.74
HADHAP40939 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.2□□□□□ -1.74
HADHAP40939 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
HADHAP40939 HMGB1P28-201ENST00000507778 552 ntBASIC4.2□□□□□ -1.74
HADHAP40939 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.2□□□□□ -1.74
HADHAP40939 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.2□□□□□ -1.74
HADHAP40939 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.2□□□□□ -1.74
HADHAP40939 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.2□□□□□ -1.74
HADHAP40939 AC105233.3-201ENST00000531125 744 ntBASIC4.2□□□□□ -1.74
HADHAP40939 MTCO2P15-201ENST00000532655 656 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms