Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SHMT2P34897 AL592494.2-201ENST00000425455 1548 ntBASIC3.39□□□□□ -1.87
SHMT2P34897 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.39□□□□□ -1.87
SHMT2P34897 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHMT2P34897 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SHMT2P34897 FRG1CP-201ENST00000358464 769 ntBASIC3.39□□□□□ -1.87
SHMT2P34897 RNA5SP50-201ENST00000363731 107 ntBASIC3.39□□□□□ -1.87
SHMT2P34897 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SHMT2P34897 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
SHMT2P34897 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.39□□□□□ -1.87
SHMT2P34897 RPL22P22-201ENST00000395439 379 ntBASIC3.39□□□□□ -1.87
SHMT2P34897 RNU2-37P-201ENST00000410695 177 ntBASIC3.39□□□□□ -1.87
SHMT2P34897 MTND4P22-201ENST00000413116 1169 ntBASIC3.39□□□□□ -1.87
SHMT2P34897 RPS7P13-201ENST00000413955 498 ntBASIC3.39□□□□□ -1.87
SHMT2P34897 RPS7P15-201ENST00000415804 584 ntBASIC3.39□□□□□ -1.87
SHMT2P34897 AC245052.5-201ENST00000416320 649 ntBASIC3.39□□□□□ -1.87
SHMT2P34897 BX842559.1-201ENST00000419615 532 ntBASIC3.39□□□□□ -1.87
SHMT2P34897 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.39□□□□□ -1.87
SHMT2P34897 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.39□□□□□ -1.87
SHMT2P34897 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.39□□□□□ -1.87
SHMT2P34897 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.39□□□□□ -1.87
SHMT2P34897 AL512637.2-201ENST00000431287 1256 ntBASIC3.39□□□□□ -1.87
SHMT2P34897 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.39□□□□□ -1.87
SHMT2P34897 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.39□□□□□ -1.87
SHMT2P34897 HSFY3P-201ENST00000444242 1191 ntBASIC3.39□□□□□ -1.87
SHMT2P34897 AL096829.2-201ENST00000446582 742 ntBASIC3.39□□□□□ -1.87
SHMT2P34897 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.39□□□□□ -1.87
SHMT2P34897 AC084357.1-201ENST00000473404 255 ntBASIC3.39□□□□□ -1.87
SHMT2P34897 RN7SL442P-201ENST00000473804 320 ntBASIC3.39□□□□□ -1.87
SHMT2P34897 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.39□□□□□ -1.87
SHMT2P34897 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.39□□□□□ -1.87
SHMT2P34897 PTP4A1P6-201ENST00000531034 478 ntBASIC3.39□□□□□ -1.87
SHMT2P34897 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.39□□□□□ -1.87
SHMT2P34897 AC008507.1-201ENST00000587506 734 ntBASIC3.39□□□□□ -1.87
SHMT2P34897 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.39□□□□□ -1.87
SHMT2P34897 BNIP3P4-201ENST00000604946 565 ntBASIC3.39□□□□□ -1.87
SHMT2P34897 AC021851.1-201ENST00000608537 1082 ntBASIC3.39□□□□□ -1.87
SHMT2P34897 AC015967.1-201ENST00000619893 476 ntBASIC3.39□□□□□ -1.87
SHMT2P34897 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
SHMT2P34897 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.39□□□□□ -1.87
SHMT2P34897 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SHMT2P34897 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.39□□□□□ -1.87
SHMT2P34897 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SHMT2P34897 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SHMT2P34897 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SHMT2P34897 MTND4P8-201ENST00000514997 1362 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 AL049781.1-201ENST00000623195 3585 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 AC005183.1-201ENST00000603687 1979 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 XPOTP1-201ENST00000443317 2398 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 SNORA71.3-201ENST00000362582 128 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 SNORA40.4-201ENST00000390971 128 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 NUP35P2-201ENST00000416748 943 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 RPS15AP6-201ENST00000420703 385 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 OSTCP5-201ENST00000425293 453 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.38□□□□□ -1.87
SHMT2P34897 USP9YP31-201ENST00000431405 881 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 ATP5JP1-201ENST00000431631 322 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 HMGB1P45-201ENST00000435986 653 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 AC006994.1-201ENST00000438212 839 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 AC092170.1-201ENST00000440211 356 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 AL358232.1-201ENST00000448030 501 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 AC233982.1-201ENST00000451247 436 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.38□□□□□ -1.87
SHMT2P34897 U3.44-201ENST00000458938 192 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 SNRPGP3-201ENST00000469405 227 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.38□□□□□ -1.87
SHMT2P34897 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.38□□□□□ -1.87
SHMT2P34897 SOD1P3-201ENST00000518682 454 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
SHMT2P34897 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.38□□□□□ -1.87
SHMT2P34897 AP000619.3-201ENST00000535634 1127 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.38□□□□□ -1.87
SHMT2P34897 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.38□□□□□ -1.87
SHMT2P34897 DUXAP6-201ENST00000553858 601 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHMT2P34897 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.38□□□□□ -1.87
SHMT2P34897 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.38□□□□□ -1.87
SHMT2P34897 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.38□□□□□ -1.87
SHMT2P34897 AC006557.5-201ENST00000603126 811 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 AC006254.3-201ENST00000603353 884 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.38□□□□□ -1.87
SHMT2P34897 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.38□□□□□ -1.87
SHMT2P34897 AC112503.2-201ENST00000609005 552 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.38□□□□□ -1.87
SHMT2P34897 U6.98-201ENST00000637157 84 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.38□□□□□ -1.87
SHMT2P34897 AC091152.2-201ENST00000591628 2569 ntBASIC3.38□□□□□ -1.87
SHMT2P34897 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SHMT2P34897 AC068647.1-201ENST00000489539 2265 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SHMT2P34897 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHMT2P34897 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHMT2P34897 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SHMT2P34897 SNORA51.12-201ENST00000384448 134 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 SNORD65C-201ENST00000390962 71 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 RNA5SP171-201ENST00000391071 115 ntBASIC3.37□□□□□ -1.87
SHMT2P34897 AP002784.2-201ENST00000397300 549 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms