Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CIITAP33076 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CIITAP33076 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CIITAP33076 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CIITAP33076 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CIITAP33076 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CIITAP33076 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.57□□□□□ -1.68
CIITAP33076 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CIITAP33076 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CIITAP33076 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.57□□□□□ -1.68
CIITAP33076 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.57□□□□□ -1.68
CIITAP33076 RNA5SP283-201ENST00000365604 119 ntBASIC4.57□□□□□ -1.68
CIITAP33076 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.57□□□□□ -1.68
CIITAP33076 MIR708-201ENST00000390708 88 ntBASIC4.57□□□□□ -1.68
CIITAP33076 MRPS36P1-201ENST00000421291 307 ntBASIC4.57□□□□□ -1.68
CIITAP33076 RPS12P5-201ENST00000423449 371 ntBASIC4.57□□□□□ -1.68
CIITAP33076 SEPT7P5-201ENST00000434048 306 ntBASIC4.57□□□□□ -1.68
CIITAP33076 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.57□□□□□ -1.68
CIITAP33076 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.57□□□□□ -1.68
CIITAP33076 ELOCP8-201ENST00000439309 332 ntBASIC4.57□□□□□ -1.68
CIITAP33076 ELOCP15-201ENST00000442090 332 ntBASIC4.57□□□□□ -1.68
CIITAP33076 AL162151.2-201ENST00000448875 158 ntBASIC4.57□□□□□ -1.68
CIITAP33076 FABP3P2-201ENST00000453169 399 ntBASIC4.57□□□□□ -1.68
CIITAP33076 AL445669.2-201ENST00000454425 421 ntBASIC4.57□□□□□ -1.68
CIITAP33076 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.57□□□□□ -1.68
CIITAP33076 GAPDHP36-201ENST00000480688 918 ntBASIC4.57□□□□□ -1.68
CIITAP33076 VPS26AP1-201ENST00000483197 979 ntBASIC4.57□□□□□ -1.68
CIITAP33076 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.57□□□□□ -1.68
CIITAP33076 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.57□□□□□ -1.68
CIITAP33076 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.57□□□□□ -1.68
CIITAP33076 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.57□□□□□ -1.68
CIITAP33076 AC008885.2-201ENST00000509506 930 ntBASIC4.57□□□□□ -1.68
CIITAP33076 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.57□□□□□ -1.68
CIITAP33076 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.57□□□□□ -1.68
CIITAP33076 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.57□□□□□ -1.68
CIITAP33076 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.57□□□□□ -1.68
CIITAP33076 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.57□□□□□ -1.68
CIITAP33076 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.57□□□□□ -1.68
CIITAP33076 YPEL5P3-201ENST00000547227 352 ntBASIC4.57□□□□□ -1.68
CIITAP33076 AC091516.1-201ENST00000549191 703 ntBASIC4.57□□□□□ -1.68
CIITAP33076 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.57□□□□□ -1.68
CIITAP33076 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.57□□□□□ -1.68
CIITAP33076 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.57□□□□□ -1.68
CIITAP33076 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.57□□□□□ -1.68
CIITAP33076 MIR4458-201ENST00000578872 75 ntBASIC4.57□□□□□ -1.68
CIITAP33076 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.57□□□□□ -1.68
CIITAP33076 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.57□□□□□ -1.68
CIITAP33076 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.57□□□□□ -1.68
CIITAP33076 AC104662.1-201ENST00000604448 511 ntBASIC4.57□□□□□ -1.68
CIITAP33076 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.57□□□□□ -1.68
CIITAP33076 AC131235.4-201ENST00000609288 620 ntBASIC4.57□□□□□ -1.68
CIITAP33076 AC122133.1-201ENST00000613964 233 ntBASIC4.57□□□□□ -1.68
CIITAP33076 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CIITAP33076 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
CIITAP33076 AC116618.1-201ENST00000634617 774 ntBASIC4.57□□□□□ -1.68
CIITAP33076 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CIITAP33076 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.57□□□□□ -1.68
CIITAP33076 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CIITAP33076 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.57□□□□□ -1.68
CIITAP33076 IQCB2P-201ENST00000401788 1633 ntBASIC4.57□□□□□ -1.68
CIITAP33076 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CIITAP33076 KPNA2P2-201ENST00000419546 1489 ntBASIC4.56□□□□□ -1.68
CIITAP33076 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CIITAP33076 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
CIITAP33076 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CIITAP33076 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.56□□□□□ -1.68
CIITAP33076 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.56□□□□□ -1.68
CIITAP33076 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.56□□□□□ -1.68
CIITAP33076 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CIITAP33076 HMGB1P5-201ENST00000255320 642 ntBASIC4.56□□□□□ -1.68
CIITAP33076 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
CIITAP33076 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CIITAP33076 Y_RNA.51-201ENST00000362725 102 ntBASIC4.56□□□□□ -1.68
CIITAP33076 RNU4-24P-201ENST00000364565 139 ntBASIC4.56□□□□□ -1.68
CIITAP33076 RNA5SP479-201ENST00000364858 117 ntBASIC4.56□□□□□ -1.68
CIITAP33076 SNORD116-4-201ENST00000384733 96 ntBASIC4.56□□□□□ -1.68
CIITAP33076 AL356967.1-201ENST00000406305 431 ntBASIC4.56□□□□□ -1.68
CIITAP33076 RN7SKP263-201ENST00000411194 309 ntBASIC4.56□□□□□ -1.68
CIITAP33076 BTF3L4P1-201ENST00000413813 468 ntBASIC4.56□□□□□ -1.68
CIITAP33076 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.56□□□□□ -1.68
CIITAP33076 AC019178.2-201ENST00000423595 505 ntBASIC4.56□□□□□ -1.68
CIITAP33076 OR8F1P-201ENST00000425243 930 ntBASIC4.56□□□□□ -1.68
CIITAP33076 OR5BE1P-201ENST00000425977 939 ntBASIC4.56□□□□□ -1.68
CIITAP33076 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.56□□□□□ -1.68
CIITAP33076 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.56□□□□□ -1.68
CIITAP33076 RPP40P1-201ENST00000426762 456 ntBASIC4.56□□□□□ -1.68
CIITAP33076 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.56□□□□□ -1.68
CIITAP33076 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.56□□□□□ -1.68
CIITAP33076 TBCAP1-201ENST00000436520 327 ntBASIC4.56□□□□□ -1.68
CIITAP33076 AL354941.1-201ENST00000438600 464 ntBASIC4.56□□□□□ -1.68
CIITAP33076 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.56□□□□□ -1.68
CIITAP33076 RPS11P1-201ENST00000451072 473 ntBASIC4.56□□□□□ -1.68
CIITAP33076 RPL31P3-201ENST00000458430 332 ntBASIC4.56□□□□□ -1.68
CIITAP33076 MTND4LP3-201ENST00000468320 276 ntBASIC4.56□□□□□ -1.68
CIITAP33076 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CIITAP33076 ACTG1P13-201ENST00000486987 1043 ntBASIC4.56□□□□□ -1.68
CIITAP33076 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.56□□□□□ -1.68
CIITAP33076 AC147055.4-201ENST00000504399 745 ntBASIC4.56□□□□□ -1.68
CIITAP33076 AC025554.1-201ENST00000505641 188 ntBASIC4.56□□□□□ -1.68
CIITAP33076 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms