Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC022079.2-201ENST00000619739 566 ntBASIC3.51□□□□□ -1.85
HOXA9P31269 AL356321.1-201ENST00000621360 228 ntBASIC3.51□□□□□ -1.85
HOXA9P31269 SCARNA15.3-201ENST00000626315 122 ntBASIC3.51□□□□□ -1.85
HOXA9P31269 SCARNA4.1-201ENST00000628597 123 ntBASIC3.51□□□□□ -1.85
HOXA9P31269 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.51□□□□□ -1.85
HOXA9P31269 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.51□□□□□ -1.85
HOXA9P31269 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXA9P31269 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HOXA9P31269 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXA9P31269 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXA9P31269 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
HOXA9P31269 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXA9P31269 CR383658.2-201ENST00000547576 1525 ntBASIC3.5□□□□□ -1.85
HOXA9P31269 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXA9P31269 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HOXA9P31269 RNA5SP197-201ENST00000363357 119 ntBASIC3.5□□□□□ -1.85
HOXA9P31269 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXA9P31269 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXA9P31269 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXA9P31269 RPL7P44-201ENST00000424827 742 ntBASIC3.5□□□□□ -1.85
HOXA9P31269 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.5□□□□□ -1.85
HOXA9P31269 MTND4P15-201ENST00000437913 1033 ntBASIC3.5□□□□□ -1.85
HOXA9P31269 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXA9P31269 ATP5C1P1-201ENST00000441945 895 ntBASIC3.5□□□□□ -1.85
HOXA9P31269 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXA9P31269 AL671855.1-201ENST00000446875 1203 ntBASIC3.5□□□□□ -1.85
HOXA9P31269 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXA9P31269 RPS3AP14-201ENST00000483907 780 ntBASIC3.5□□□□□ -1.85
HOXA9P31269 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXA9P31269 RPL7P23-201ENST00000493874 747 ntBASIC3.5□□□□□ -1.85
HOXA9P31269 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXA9P31269 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.5□□□□□ -1.85
HOXA9P31269 RN7SKP234-201ENST00000517173 224 ntBASIC3.5□□□□□ -1.85
HOXA9P31269 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXA9P31269 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HOXA9P31269 HIGD1AP1-201ENST00000550979 275 ntBASIC3.5□□□□□ -1.85
HOXA9P31269 CENPUP2-201ENST00000555897 1186 ntBASIC3.5□□□□□ -1.85
HOXA9P31269 AC023158.1-201ENST00000561632 1025 ntBASIC3.5□□□□□ -1.85
HOXA9P31269 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXA9P31269 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXA9P31269 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXA9P31269 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXA9P31269 AC011816.2-201ENST00000607089 556 ntBASIC3.5□□□□□ -1.85
HOXA9P31269 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.5□□□□□ -1.85
HOXA9P31269 AC091948.2-201ENST00000636510 279 ntBASIC3.5□□□□□ -1.85
HOXA9P31269 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HOXA9P31269 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXA9P31269 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXA9P31269 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXA9P31269 AC007256.1-201ENST00000392253 2765 ntBASIC3.5□□□□□ -1.85
HOXA9P31269 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HOXA9P31269 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
HOXA9P31269 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXA9P31269 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXA9P31269 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXA9P31269 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXA9P31269 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXA9P31269 RNU6-317P-201ENST00000384031 107 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 SNORA70E-201ENST00000384492 135 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 AL356057.1-202ENST00000402263 756 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 AL353692.2-201ENST00000407054 335 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 Z99755.1-201ENST00000414048 380 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.49□□□□□ -1.85
HOXA9P31269 AL049610.1-201ENST00000423374 372 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 ZNF965P-201ENST00000432501 817 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 NEK4P1-201ENST00000433383 879 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 SETP5-201ENST00000437270 562 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 RSL24D1P3-201ENST00000449255 495 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 RPL37P3-201ENST00000456825 293 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 RPL23AP67-201ENST00000465341 474 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 AC146507.1-201ENST00000468335 354 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXA9P31269 PCBP2P3-201ENST00000509726 843 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 AC110792.2-201ENST00000510278 224 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 SETP12-201ENST00000514068 805 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 SNORA70.19-201ENST00000516717 90 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXA9P31269 OR8K2P-201ENST00000524645 927 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 OR5AP1P-201ENST00000529730 940 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXA9P31269 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXA9P31269 MIR3186-201ENST00000577404 85 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 AL450270.1-201ENST00000606160 391 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 AC022149.2-201ENST00000621061 203 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 AL356094.1-201ENST00000624663 1212 ntBASIC3.49□□□□□ -1.85
HOXA9P31269 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXA9P31269 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXA9P31269 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.48□□□□□ -1.85
HOXA9P31269 AL157700.1-201ENST00000561973 1432 ntBASIC3.48□□□□□ -1.85
HOXA9P31269 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HOXA9P31269 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
HOXA9P31269 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXA9P31269 MORF4L1P7-201ENST00000426038 703 ntBASIC3.48□□□□□ -1.85
HOXA9P31269 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXA9P31269 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.48□□□□□ -1.85
HOXA9P31269 AL049873.1-201ENST00000480540 376 ntBASIC3.48□□□□□ -1.85
HOXA9P31269 AC011825.1-201ENST00000484967 388 ntBASIC3.48□□□□□ -1.85
HOXA9P31269 AC020893.1-201ENST00000502452 580 ntBASIC3.48□□□□□ -1.85
HOXA9P31269 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.48□□□□□ -1.85
HOXA9P31269 RNU6-1308P-201ENST00000516817 103 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms