Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN6P29350 AC048346.1-201ENST00000510247 144 ntBASIC3.6□□□□□ -1.83
PTPN6P29350 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN6P29350 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.6□□□□□ -1.83
PTPN6P29350 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN6P29350 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN6P29350 MTND4LP31-201ENST00000514859 294 ntBASIC3.6□□□□□ -1.83
PTPN6P29350 IGKV2-23-201ENST00000518729 323 ntBASIC3.6□□□□□ -1.83
PTPN6P29350 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.6□□□□□ -1.83
PTPN6P29350 AC008489.1-201ENST00000524271 483 ntBASIC3.6□□□□□ -1.83
PTPN6P29350 OR4A12P-201ENST00000530847 918 ntBASIC3.6□□□□□ -1.83
PTPN6P29350 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN6P29350 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.6□□□□□ -1.83
PTPN6P29350 AC034105.4-201ENST00000568304 277 ntBASIC3.6□□□□□ -1.83
PTPN6P29350 AC090666.1-201ENST00000578241 445 ntBASIC3.6□□□□□ -1.83
PTPN6P29350 AL354760.1-201ENST00000608357 643 ntBASIC3.6□□□□□ -1.83
PTPN6P29350 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN6P29350 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTPN6P29350 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.6□□□□□ -1.83
PTPN6P29350 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PTPN6P29350 AC092184.1-201ENST00000625042 715 ntBASIC3.6□□□□□ -1.83
PTPN6P29350 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.6□□□□□ -1.83
PTPN6P29350 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.6□□□□□ -1.83
PTPN6P29350 MTND5P31-201ENST00000419366 1374 ntBASIC3.6□□□□□ -1.83
PTPN6P29350 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTPN6P29350 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
PTPN6P29350 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
PTPN6P29350 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
PTPN6P29350 AL359893.1-201ENST00000447628 1580 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PTPN6P29350 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PTPN6P29350 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PTPN6P29350 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
PTPN6P29350 RNA5SP295-201ENST00000362655 121 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 MIR23B-201ENST00000384832 97 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 MCTS2P-201ENST00000394552 546 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.59□□□□□ -1.83
PTPN6P29350 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.59□□□□□ -1.83
PTPN6P29350 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 OFD1P18Y-201ENST00000420889 959 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.59□□□□□ -1.83
PTPN6P29350 AC009237.2-201ENST00000421358 284 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.59□□□□□ -1.83
PTPN6P29350 AL513174.1-201ENST00000423182 629 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 AC002075.2-201ENST00000425207 252 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 RPL7P2-201ENST00000427639 268 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 B3GNT2P1-201ENST00000434960 952 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 ARF4P4-201ENST00000439608 520 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 RPS29P7-201ENST00000439662 171 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 AL645931.1-201ENST00000439737 410 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PTPN6P29350 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.59□□□□□ -1.83
PTPN6P29350 NDUFA5P7-201ENST00000452914 242 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 MTCO3P16-201ENST00000454456 754 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.59□□□□□ -1.83
PTPN6P29350 RN7SL132P-201ENST00000478131 296 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.59□□□□□ -1.83
PTPN6P29350 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.59□□□□□ -1.83
PTPN6P29350 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.59□□□□□ -1.83
PTPN6P29350 RN7SKP83-201ENST00000516512 178 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.59□□□□□ -1.83
PTPN6P29350 AP004371.1-201ENST00000525240 214 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.59□□□□□ -1.83
PTPN6P29350 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PTPN6P29350 AP003385.6-201ENST00000531603 374 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.59□□□□□ -1.83
PTPN6P29350 AC092470.1-201ENST00000546187 132 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.59□□□□□ -1.83
PTPN6P29350 ZNF971P-201ENST00000562068 1249 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.59□□□□□ -1.83
PTPN6P29350 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.59□□□□□ -1.83
PTPN6P29350 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.59□□□□□ -1.83
PTPN6P29350 BNIP3P33-201ENST00000598912 569 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 SNORA62.6-201ENST00000606322 83 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 AC124016.2-201ENST00000610058 665 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 AL392048.1-201ENST00000613946 534 ntBASIC3.59□□□□□ -1.83
PTPN6P29350 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.59□□□□□ -1.83
PTPN6P29350 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
PTPN6P29350 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PTPN6P29350 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PTPN6P29350 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PTPN6P29350 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PTPN6P29350 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
PTPN6P29350 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
PTPN6P29350 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTPN6P29350 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTPN6P29350 RNU6-283P-201ENST00000364788 107 ntBASIC3.58□□□□□ -1.84
PTPN6P29350 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PTPN6P29350 AL359837.1-201ENST00000381357 287 ntBASIC3.58□□□□□ -1.84
PTPN6P29350 SOD2P1-201ENST00000396543 562 ntBASIC3.58□□□□□ -1.84
PTPN6P29350 RPL31P1-201ENST00000398116 372 ntBASIC3.58□□□□□ -1.84
PTPN6P29350 AL121978.1-201ENST00000402778 359 ntBASIC3.58□□□□□ -1.84
PTPN6P29350 AL391417.1-201ENST00000404100 426 ntBASIC3.58□□□□□ -1.84
PTPN6P29350 AL138878.1-201ENST00000405131 347 ntBASIC3.58□□□□□ -1.84
PTPN6P29350 RN7SKP202-201ENST00000410439 330 ntBASIC3.58□□□□□ -1.84
PTPN6P29350 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.58□□□□□ -1.84
PTPN6P29350 RPL21P66-201ENST00000426566 466 ntBASIC3.58□□□□□ -1.84
PTPN6P29350 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.58□□□□□ -1.84
PTPN6P29350 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.58□□□□□ -1.84
PTPN6P29350 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms