Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.57□□□□□ -1.84
XRCC1P18887 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.57□□□□□ -1.84
XRCC1P18887 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
XRCC1P18887 MTND4P8-201ENST00000514997 1362 ntBASIC3.57□□□□□ -1.84
XRCC1P18887 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.57□□□□□ -1.84
XRCC1P18887 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.57□□□□□ -1.84
XRCC1P18887 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.57□□□□□ -1.84
XRCC1P18887 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.57□□□□□ -1.84
XRCC1P18887 AC090079.2-201ENST00000575289 768 ntBASIC3.57□□□□□ -1.84
XRCC1P18887 BPTFP1-201ENST00000579209 492 ntBASIC3.57□□□□□ -1.84
XRCC1P18887 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.57□□□□□ -1.84
XRCC1P18887 LLPHP1-201ENST00000603571 367 ntBASIC3.57□□□□□ -1.84
XRCC1P18887 AC010591.1-201ENST00000603941 649 ntBASIC3.57□□□□□ -1.84
XRCC1P18887 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.57□□□□□ -1.84
XRCC1P18887 AP004247.3-201ENST00000608682 624 ntBASIC3.57□□□□□ -1.84
XRCC1P18887 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
XRCC1P18887 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.57□□□□□ -1.84
XRCC1P18887 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
XRCC1P18887 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
XRCC1P18887 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
XRCC1P18887 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
XRCC1P18887 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
XRCC1P18887 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
XRCC1P18887 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
XRCC1P18887 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
XRCC1P18887 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
XRCC1P18887 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.56□□□□□ -1.84
XRCC1P18887 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.56□□□□□ -1.84
XRCC1P18887 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.56□□□□□ -1.84
XRCC1P18887 MIR124-3-201ENST00000384866 87 ntBASIC3.56□□□□□ -1.84
XRCC1P18887 AC009237.5-201ENST00000414271 501 ntBASIC3.56□□□□□ -1.84
XRCC1P18887 PAICSP7-201ENST00000419829 962 ntBASIC3.56□□□□□ -1.84
XRCC1P18887 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.56□□□□□ -1.84
XRCC1P18887 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.56□□□□□ -1.84
XRCC1P18887 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.56□□□□□ -1.84
XRCC1P18887 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.56□□□□□ -1.84
XRCC1P18887 RPL37P6-202ENST00000464216 403 ntBASIC3.56□□□□□ -1.84
XRCC1P18887 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.56□□□□□ -1.84
XRCC1P18887 ACTG1P13-201ENST00000486987 1043 ntBASIC3.56□□□□□ -1.84
XRCC1P18887 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.56□□□□□ -1.84
XRCC1P18887 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.56□□□□□ -1.84
XRCC1P18887 RNU6-416P-201ENST00000516265 103 ntBASIC3.56□□□□□ -1.84
XRCC1P18887 Vault.1-201ENST00000516474 102 ntBASIC3.56□□□□□ -1.84
XRCC1P18887 RN7SKP60-201ENST00000516985 239 ntBASIC3.56□□□□□ -1.84
XRCC1P18887 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.56□□□□□ -1.84
XRCC1P18887 IGKV2D-19-201ENST00000523346 262 ntBASIC3.56□□□□□ -1.84
XRCC1P18887 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.56□□□□□ -1.84
XRCC1P18887 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.56□□□□□ -1.84
XRCC1P18887 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.56□□□□□ -1.84
XRCC1P18887 AL139174.1-201ENST00000531489 886 ntBASIC3.56□□□□□ -1.84
XRCC1P18887 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.56□□□□□ -1.84
XRCC1P18887 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.56□□□□□ -1.84
XRCC1P18887 AC087894.1-201ENST00000538359 518 ntBASIC3.56□□□□□ -1.84
XRCC1P18887 AC004217.3-201ENST00000551552 878 ntBASIC3.56□□□□□ -1.84
XRCC1P18887 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.56□□□□□ -1.84
XRCC1P18887 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.56□□□□□ -1.84
XRCC1P18887 AC010735.1-201ENST00000567305 1026 ntBASIC3.56□□□□□ -1.84
XRCC1P18887 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.56□□□□□ -1.84
XRCC1P18887 AC008687.2-201ENST00000597865 520 ntBASIC3.56□□□□□ -1.84
XRCC1P18887 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.56□□□□□ -1.84
XRCC1P18887 AC009948.4-201ENST00000604692 675 ntBASIC3.56□□□□□ -1.84
XRCC1P18887 RNA5SP108-201ENST00000605921 117 ntBASIC3.56□□□□□ -1.84
XRCC1P18887 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.56□□□□□ -1.84
XRCC1P18887 AL356118.1-201ENST00000635272 1078 ntBASIC3.56□□□□□ -1.84
XRCC1P18887 AC119674.1-207ENST00000641355 633 ntBASIC3.56□□□□□ -1.84
XRCC1P18887 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
XRCC1P18887 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.56□□□□□ -1.84
XRCC1P18887 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.56□□□□□ -1.84
XRCC1P18887 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
XRCC1P18887 NMD3P1-201ENST00000439704 1488 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 SGO1P1-201ENST00000603525 1447 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 AC234772.1-201ENST00000377927 937 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 AP002088.1-201ENST00000382740 395 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 MIR7-3-201ENST00000384898 110 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 DSTNP4-201ENST00000399472 474 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 AL035405.1-201ENST00000400795 710 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.55□□□□□ -1.84
XRCC1P18887 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.55□□□□□ -1.84
XRCC1P18887 FO393414.1-201ENST00000428697 1184 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 CYCSP4-201ENST00000429682 331 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 HMGN2P31-201ENST00000432430 273 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
XRCC1P18887 AL645931.1-201ENST00000439737 410 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.55□□□□□ -1.84
XRCC1P18887 AC010655.1-201ENST00000449336 292 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 HMGN3P1-201ENST00000453847 193 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 AC099563.1-201ENST00000456086 418 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.55□□□□□ -1.84
XRCC1P18887 RPL23AP14-201ENST00000468281 468 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 RPL21P18-201ENST00000469899 480 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.55□□□□□ -1.84
XRCC1P18887 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
XRCC1P18887 AC110768.1-201ENST00000509222 400 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 RN7SKP277-201ENST00000516895 283 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 DUXAP2-201ENST00000519198 589 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.55□□□□□ -1.84
XRCC1P18887 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.55□□□□□ -1.84
XRCC1P18887 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.55□□□□□ -1.84
XRCC1P18887 AC008011.1-201ENST00000545989 227 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 AC011602.1-201ENST00000546484 331 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms