Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.1□□□□□ -1.59
COL6A2P12110 Y_RNA.159-201ENST00000363674 87 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 RNA5SP242-201ENST00000364171 118 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 RN7SKP124-201ENST00000364730 341 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.1□□□□□ -1.59
COL6A2P12110 RNA5SP339-201ENST00000390987 122 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 MIR1271-201ENST00000408537 86 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 RN7SKP229-201ENST00000410465 302 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 AC127391.1-201ENST00000411737 98 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.1□□□□□ -1.59
COL6A2P12110 AC013429.2-201ENST00000418798 781 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.1□□□□□ -1.59
COL6A2P12110 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.1□□□□□ -1.59
COL6A2P12110 AC093655.2-201ENST00000425735 631 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 OR51AB1P-201ENST00000429046 620 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.1□□□□□ -1.59
COL6A2P12110 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC5.1□□□□□ -1.59
COL6A2P12110 YWHAEP1-201ENST00000453697 763 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 AP1S2P1-201ENST00000457344 379 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
COL6A2P12110 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
COL6A2P12110 AC100832.1-201ENST00000471945 383 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.1□□□□□ -1.59
COL6A2P12110 RPL30P11-201ENST00000495304 339 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 HMGN1P12-201ENST00000499125 195 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 RNF138P1-201ENST00000502765 546 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.1□□□□□ -1.59
COL6A2P12110 MTCO1P35-201ENST00000515270 228 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.1□□□□□ -1.59
COL6A2P12110 RNU6-1281P-201ENST00000516223 105 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
COL6A2P12110 BNIP3P1-201ENST00000547295 580 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 AL359212.1-201ENST00000556608 614 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.1□□□□□ -1.59
COL6A2P12110 RPL10P14-201ENST00000565265 298 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 AC011978.2-201ENST00000569835 2054 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL6A2P12110 AL162413.1-201ENST00000603198 110 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 AC073091.2-201ENST00000603205 907 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 MIR98-201ENST00000606724 119 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 AC104118.1-201ENST00000607625 1589 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.1□□□□□ -1.59
COL6A2P12110 MIR6768-201ENST00000610734 72 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 AC079395.2-201ENST00000610982 737 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.1□□□□□ -1.59
COL6A2P12110 AL133173.2-201ENST00000614270 90 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 MIR6886-201ENST00000619864 61 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
COL6A2P12110 MIR8080-201ENST00000622224 89 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 FER-210ENST00000628534 558 ntTSL 5 BASIC5.1□□□□□ -1.59
COL6A2P12110 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.1□□□□□ -1.59
COL6A2P12110 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.1□□□□□ -1.59
COL6A2P12110 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.1□□□□□ -1.59
COL6A2P12110 AC099654.10-201ENST00000640395 161 ntBASIC5.1□□□□□ -1.59
COL6A2P12110 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL6A2P12110 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL6A2P12110 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.1□□□□□ -1.59
COL6A2P12110 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL6A2P12110 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL6A2P12110 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL6A2P12110 DDX18P3-201ENST00000404856 2007 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL6A2P12110 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
COL6A2P12110 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
COL6A2P12110 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
COL6A2P12110 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL6A2P12110 MTCO1P11-201ENST00000429111 1528 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.09□□□□□ -1.59
COL6A2P12110 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.09□□□□□ -1.59
COL6A2P12110 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL6A2P12110 Y_RNA.160-201ENST00000363677 92 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 RNU6-853P-201ENST00000364306 107 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 RNU6-1322P-201ENST00000364309 107 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 BTBD10P2-201ENST00000404779 676 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 RNU6-908P-201ENST00000410160 94 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 JKAMPP1-201ENST00000413804 919 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.09□□□□□ -1.59
COL6A2P12110 CHEK2P5-201ENST00000423877 246 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.09□□□□□ -1.59
COL6A2P12110 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.09□□□□□ -1.59
COL6A2P12110 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5.09□□□□□ -1.59
COL6A2P12110 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC5.09□□□□□ -1.59
COL6A2P12110 EEF1A1P1-201ENST00000447052 739 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL6A2P12110 AC104073.1-201ENST00000451988 151 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.09□□□□□ -1.59
COL6A2P12110 UBDP1-202ENST00000457888 382 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 APOOP2-201ENST00000461561 539 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 AC091180.1-201ENST00000462104 372 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 RPL36AP51-201ENST00000487216 318 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.09□□□□□ -1.59
COL6A2P12110 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.09□□□□□ -1.59
COL6A2P12110 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.09□□□□□ -1.59
COL6A2P12110 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.09□□□□□ -1.59
COL6A2P12110 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.09□□□□□ -1.59
COL6A2P12110 AP003072.2-201ENST00000527756 676 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms