Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 AL445584.1-201ENST00000431451 330 ntBASIC3.6□□□□□ -1.83
CCDC172P0C7W6 AC073063.1-201ENST00000434352 607 ntBASIC3.6□□□□□ -1.83
CCDC172P0C7W6 CST9LP2-201ENST00000437612 320 ntBASIC3.6□□□□□ -1.83
CCDC172P0C7W6 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC172P0C7W6 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC172P0C7W6 AL590639.1-201ENST00000456484 337 ntBASIC3.6□□□□□ -1.83
CCDC172P0C7W6 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.6□□□□□ -1.83
CCDC172P0C7W6 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
CCDC172P0C7W6 AC118282.1-201ENST00000506408 765 ntBASIC3.6□□□□□ -1.83
CCDC172P0C7W6 AC119751.1-201ENST00000513357 765 ntBASIC3.6□□□□□ -1.83
CCDC172P0C7W6 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC172P0C7W6 AC008562.1-201ENST00000521763 330 ntBASIC3.6□□□□□ -1.83
CCDC172P0C7W6 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC172P0C7W6 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC172P0C7W6 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC172P0C7W6 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC172P0C7W6 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.6□□□□□ -1.83
CCDC172P0C7W6 AL109653.1-201ENST00000603091 248 ntBASIC3.6□□□□□ -1.83
CCDC172P0C7W6 uc_338.1-201ENST00000612113 180 ntBASIC3.6□□□□□ -1.83
CCDC172P0C7W6 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.6□□□□□ -1.83
CCDC172P0C7W6 AC243312.2-201ENST00000623340 601 ntBASIC3.6□□□□□ -1.83
CCDC172P0C7W6 AC090617.7-201ENST00000623952 126 ntBASIC3.6□□□□□ -1.83
CCDC172P0C7W6 LRRC77P-213ENST00000637727 880 ntBASIC3.6□□□□□ -1.83
CCDC172P0C7W6 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC172P0C7W6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC172P0C7W6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC172P0C7W6 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC172P0C7W6 SNORA51.4-201ENST00000364993 124 ntBASIC3.59□□□□□ -1.83
CCDC172P0C7W6 MIR218-2-201ENST00000385006 110 ntBASIC3.59□□□□□ -1.83
CCDC172P0C7W6 MIR1193-201ENST00000408109 78 ntBASIC3.59□□□□□ -1.83
CCDC172P0C7W6 RNU4-74P-201ENST00000411280 161 ntBASIC3.59□□□□□ -1.83
CCDC172P0C7W6 BX842559.1-201ENST00000419615 532 ntBASIC3.59□□□□□ -1.83
CCDC172P0C7W6 AC023128.2-201ENST00000420880 1223 ntBASIC3.59□□□□□ -1.83
CCDC172P0C7W6 ATP5JP1-201ENST00000431631 322 ntBASIC3.59□□□□□ -1.83
CCDC172P0C7W6 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC172P0C7W6 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC172P0C7W6 HMGB1P48-201ENST00000446155 598 ntBASIC3.59□□□□□ -1.83
CCDC172P0C7W6 RPL21P23-201ENST00000446654 460 ntBASIC3.59□□□□□ -1.83
CCDC172P0C7W6 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC172P0C7W6 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC172P0C7W6 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC172P0C7W6 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC172P0C7W6 AC092593.2-201ENST00000513866 913 ntBASIC3.59□□□□□ -1.83
CCDC172P0C7W6 AC008494.2-201ENST00000514544 370 ntBASIC3.59□□□□□ -1.83
CCDC172P0C7W6 HIGD1AP3-201ENST00000515857 278 ntBASIC3.59□□□□□ -1.83
CCDC172P0C7W6 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC172P0C7W6 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
CCDC172P0C7W6 AC008676.3-201ENST00000521237 435 ntBASIC3.59□□□□□ -1.83
CCDC172P0C7W6 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC172P0C7W6 AC239860.2-201ENST00000525886 270 ntBASIC3.59□□□□□ -1.83
CCDC172P0C7W6 MTCYBP41-201ENST00000528913 1123 ntBASIC3.59□□□□□ -1.83
CCDC172P0C7W6 AC004923.2-201ENST00000529649 369 ntBASIC3.59□□□□□ -1.83
CCDC172P0C7W6 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC172P0C7W6 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC172P0C7W6 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC172P0C7W6 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC172P0C7W6 AC093227.2-201ENST00000589357 285 ntBASIC3.59□□□□□ -1.83
CCDC172P0C7W6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC172P0C7W6 AC084036.1-201ENST00000609190 508 ntBASIC3.59□□□□□ -1.83
CCDC172P0C7W6 AC244258.1-201ENST00000637553 1071 ntBASIC3.59□□□□□ -1.83
CCDC172P0C7W6 AL356274.2-201ENST00000624379 3752 ntBASIC3.59□□□□□ -1.84
CCDC172P0C7W6 AC116096.1-201ENST00000566804 2314 ntBASIC3.59□□□□□ -1.84
CCDC172P0C7W6 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
CCDC172P0C7W6 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 MIR7-1-201ENST00000384871 110 ntBASIC3.58□□□□□ -1.84
CCDC172P0C7W6 RNU1-101P-201ENST00000391171 127 ntBASIC3.58□□□□□ -1.84
CCDC172P0C7W6 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 SYF2P2-201ENST00000417620 583 ntBASIC3.58□□□□□ -1.84
CCDC172P0C7W6 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 HSPD1P21-201ENST00000436541 245 ntBASIC3.58□□□□□ -1.84
CCDC172P0C7W6 RAD1P2-201ENST00000446414 663 ntBASIC3.58□□□□□ -1.84
CCDC172P0C7W6 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 AL513343.1-201ENST00000451818 792 ntBASIC3.58□□□□□ -1.84
CCDC172P0C7W6 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 AC104986.1-201ENST00000517978 436 ntBASIC3.58□□□□□ -1.84
CCDC172P0C7W6 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 MTCO3P24-201ENST00000572729 782 ntBASIC3.58□□□□□ -1.84
CCDC172P0C7W6 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 HSPA8P19-201ENST00000505359 1517 ntBASIC3.58□□□□□ -1.84
CCDC172P0C7W6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.58□□□□□ -1.84
CCDC172P0C7W6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms