Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
FREM3P0C091 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
FREM3P0C091 AC110792.3-201ENST00000595906 1614 ntBASIC2.61□□□□□ -1.99
FREM3P0C091 PNPT1P2-201ENST00000456768 2050 ntBASIC2.61□□□□□ -1.99
FREM3P0C091 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
FREM3P0C091 SNORA9.2-201ENST00000365361 133 ntBASIC2.61□□□□□ -1.99
FREM3P0C091 XGY1-201ENST00000381172 446 ntBASIC2.61□□□□□ -1.99
FREM3P0C091 UBE2V1P2-201ENST00000397758 440 ntBASIC2.61□□□□□ -1.99
FREM3P0C091 AC073464.3-201ENST00000422564 712 ntBASIC2.61□□□□□ -1.99
FREM3P0C091 HMGB1P25-201ENST00000468402 607 ntBASIC2.61□□□□□ -1.99
FREM3P0C091 AC090525.1-201ENST00000479116 478 ntBASIC2.61□□□□□ -1.99
FREM3P0C091 KCTD9P5-201ENST00000504141 1170 ntBASIC2.61□□□□□ -1.99
FREM3P0C091 SCGB1D5P-201ENST00000515134 247 ntBASIC2.61□□□□□ -1.99
FREM3P0C091 HMGB1P6-201ENST00000569046 646 ntBASIC2.61□□□□□ -1.99
FREM3P0C091 VN1R79P-201ENST00000593540 513 ntBASIC2.61□□□□□ -1.99
FREM3P0C091 AL356274.1-201ENST00000617064 410 ntBASIC2.61□□□□□ -1.99
FREM3P0C091 AC067852.7-201ENST00000623270 535 ntBASIC2.61□□□□□ -1.99
FREM3P0C091 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.61□□□□□ -1.99
FREM3P0C091 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
FREM3P0C091 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.61□□□□□ -1.99
FREM3P0C091 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
FREM3P0C091 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
FREM3P0C091 MIR9-1-201ENST00000385198 89 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC2.6□□□□□ -1.99
FREM3P0C091 AL138785.1-201ENST00000425821 331 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 RPL21P40-201ENST00000428586 483 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 S100A11P1-201ENST00000477525 312 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 POU5F1P7-201ENST00000508759 541 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 HIGD1AP13-201ENST00000509878 289 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.6□□□□□ -1.99
FREM3P0C091 CYCSP39-201ENST00000565821 309 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 MIR3186-201ENST00000577404 85 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 LARP7P3-201ENST00000579888 337 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.6□□□□□ -1.99
FREM3P0C091 AL355493.4-201ENST00000618530 292 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 AL137790.1-201ENST00000634283 177 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 MTCO1P14-201ENST00000441695 1559 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
FREM3P0C091 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
FREM3P0C091 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.6□□□□□ -1.99
FREM3P0C091 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
FREM3P0C091 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
FREM3P0C091 AC007529.1-201ENST00000418574 2178 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 SNORA80A-201ENST00000363922 136 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 RNU4-7P-201ENST00000364758 141 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 RNU6-603P-201ENST00000411403 107 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 AC022018.1-201ENST00000430685 241 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 AC107083.1-201ENST00000439643 279 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC2.6□□□□□ -1.99
FREM3P0C091 HMGB3P21-201ENST00000452483 547 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 RPL21P71-201ENST00000465598 459 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 RPS3AP43-201ENST00000479743 781 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
FREM3P0C091 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.6□□□□□ -1.99
FREM3P0C091 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.6□□□□□ -1.99
FREM3P0C091 MTHFD2P4-201ENST00000515074 1025 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 AC093331.1-201ENST00000521474 169 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.6□□□□□ -1.99
FREM3P0C091 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.6□□□□□ -1.99
FREM3P0C091 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.6□□□□□ -1.99
FREM3P0C091 AC055876.1-202ENST00000567053 138 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 MIR4319-201ENST00000577285 85 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.6□□□□□ -1.99
FREM3P0C091 AC012119.1-201ENST00000603184 222 ntBASIC2.6□□□□□ -1.99
FREM3P0C091 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.6□□□□□ -1.99
FREM3P0C091 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
FREM3P0C091 AIMP1P1-201ENST00000418670 937 ntBASIC2.59□□□□□ -1.99
FREM3P0C091 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.59□□□□□ -1.99
FREM3P0C091 AL353093.1-201ENST00000441292 436 ntBASIC2.59□□□□□ -1.99
FREM3P0C091 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.59□□□□□ -1.99
FREM3P0C091 AC068305.1-201ENST00000497406 726 ntBASIC2.59□□□□□ -1.99
FREM3P0C091 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.59□□□□□ -1.99
FREM3P0C091 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.59□□□□□ -1.99
FREM3P0C091 FAM60DP-201ENST00000524174 632 ntBASIC2.59□□□□□ -1.99
FREM3P0C091 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.59□□□□□ -1.99
FREM3P0C091 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.59□□□□□ -1.99
FREM3P0C091 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
FREM3P0C091 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
FREM3P0C091 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
FREM3P0C091 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
FREM3P0C091 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
FREM3P0C091 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.59□□□□□ -2
FREM3P0C091 NACA3P-201ENST00000359690 648 ntBASIC2.59□□□□□ -2
FREM3P0C091 RNU6-697P-201ENST00000363348 107 ntBASIC2.59□□□□□ -2
FREM3P0C091 SNORA5B-201ENST00000363786 132 ntBASIC2.59□□□□□ -2
FREM3P0C091 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.59□□□□□ -2
FREM3P0C091 RNU2-52P-201ENST00000410680 190 ntBASIC2.59□□□□□ -2
FREM3P0C091 RPL23AP4-201ENST00000427757 463 ntBASIC2.59□□□□□ -2
FREM3P0C091 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
FREM3P0C091 VN1R96P-201ENST00000446052 858 ntBASIC2.59□□□□□ -2
FREM3P0C091 FTH1P25-201ENST00000447665 469 ntBASIC2.59□□□□□ -2
FREM3P0C091 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.59□□□□□ -2
FREM3P0C091 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.59□□□□□ -2
FREM3P0C091 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC2.59□□□□□ -2
FREM3P0C091 NRBF2P5-201ENST00000603087 788 ntBASIC2.59□□□□□ -2
FREM3P0C091 AC034236.3-201ENST00000605999 461 ntBASIC2.59□□□□□ -2
FREM3P0C091 AC016252.1-201ENST00000609721 474 ntBASIC2.59□□□□□ -2
FREM3P0C091 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.59□□□□□ -2
FREM3P0C091 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.59□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms