Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AL672296.1-201ENST00000427780 2158 ntBASIC3.53□□□□□ -1.84
RETP07949 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
RETP07949 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RETP07949 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RETP07949 ANKRD36P1-201ENST00000344424 659 ntBASIC3.53□□□□□ -1.84
RETP07949 UBE2V1P2-201ENST00000397758 440 ntBASIC3.53□□□□□ -1.84
RETP07949 CCNB2P1-201ENST00000399411 1150 ntBASIC3.53□□□□□ -1.84
RETP07949 OSTCP5-201ENST00000425293 453 ntBASIC3.53□□□□□ -1.84
RETP07949 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.53□□□□□ -1.84
RETP07949 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.53□□□□□ -1.84
RETP07949 TPRKBP1-201ENST00000456243 481 ntBASIC3.53□□□□□ -1.84
RETP07949 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.53□□□□□ -1.84
RETP07949 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.53□□□□□ -1.84
RETP07949 AC096576.1-201ENST00000489014 359 ntBASIC3.53□□□□□ -1.84
RETP07949 FTH1P24-201ENST00000503502 462 ntBASIC3.53□□□□□ -1.84
RETP07949 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.53□□□□□ -1.84
RETP07949 PCBP2P3-201ENST00000509726 843 ntBASIC3.53□□□□□ -1.84
RETP07949 ARL2BPP6-201ENST00000512757 439 ntBASIC3.53□□□□□ -1.84
RETP07949 RPL12P22-201ENST00000519073 490 ntBASIC3.53□□□□□ -1.84
RETP07949 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
RETP07949 AL139174.1-201ENST00000531489 886 ntBASIC3.53□□□□□ -1.84
RETP07949 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.53□□□□□ -1.84
RETP07949 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.53□□□□□ -1.84
RETP07949 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.53□□□□□ -1.84
RETP07949 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.53□□□□□ -1.84
RETP07949 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.53□□□□□ -1.84
RETP07949 MIR548Y-201ENST00000582739 110 ntBASIC3.53□□□□□ -1.84
RETP07949 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.53□□□□□ -1.84
RETP07949 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.53□□□□□ -1.84
RETP07949 AL354696.1-201ENST00000614652 497 ntBASIC3.53□□□□□ -1.84
RETP07949 AC121761.2-201ENST00000617300 689 ntBASIC3.53□□□□□ -1.84
RETP07949 AL590240.3-201ENST00000621416 943 ntBASIC3.53□□□□□ -1.84
RETP07949 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RETP07949 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RETP07949 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
RETP07949 NMD3P1-201ENST00000439704 1488 ntBASIC3.53□□□□□ -1.84
RETP07949 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.53□□□□□ -1.84
RETP07949 ZNF807-201ENST00000328088 1707 ntBASIC3.53□□□□□ -1.85
RETP07949 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
RETP07949 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.53□□□□□ -1.85
RETP07949 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
RETP07949 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RETP07949 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RETP07949 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.52□□□□□ -1.85
RETP07949 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RETP07949 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
RETP07949 SNORA80A-201ENST00000363922 136 ntBASIC3.52□□□□□ -1.85
RETP07949 RNU6-7-201ENST00000364784 107 ntBASIC3.52□□□□□ -1.85
RETP07949 RNU6-8-201ENST00000365467 107 ntBASIC3.52□□□□□ -1.85
RETP07949 MIR153-1-201ENST00000384914 90 ntBASIC3.52□□□□□ -1.85
RETP07949 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
RETP07949 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.52□□□□□ -1.85
RETP07949 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.52□□□□□ -1.85
RETP07949 AL691517.1-201ENST00000440833 1235 ntBASIC3.52□□□□□ -1.85
RETP07949 XKRY2-201ENST00000442362 1093 ntBASIC3.52□□□□□ -1.85
RETP07949 AC099563.1-201ENST00000456086 418 ntBASIC3.52□□□□□ -1.85
RETP07949 AC097462.2-201ENST00000504623 481 ntBASIC3.52□□□□□ -1.85
RETP07949 AC087272.1-201ENST00000523624 533 ntBASIC3.52□□□□□ -1.85
RETP07949 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.52□□□□□ -1.85
RETP07949 MIR4425-201ENST00000580572 84 ntBASIC3.52□□□□□ -1.85
RETP07949 AC011468.4-201ENST00000603942 409 ntBASIC3.52□□□□□ -1.85
RETP07949 AC015802.5-201ENST00000607478 399 ntBASIC3.52□□□□□ -1.85
RETP07949 AC112503.1-201ENST00000608436 391 ntBASIC3.52□□□□□ -1.85
RETP07949 RMST_8.1-201ENST00000610287 165 ntBASIC3.52□□□□□ -1.85
RETP07949 AL592295.2-201ENST00000612578 206 ntBASIC3.52□□□□□ -1.85
RETP07949 MIR7973-1-201ENST00000614683 76 ntBASIC3.52□□□□□ -1.85
RETP07949 AC003001.2-201ENST00000616294 831 ntBASIC3.52□□□□□ -1.85
RETP07949 AC006065.5-201ENST00000623427 349 ntBASIC3.52□□□□□ -1.85
RETP07949 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.52□□□□□ -1.85
RETP07949 RNF6P1-201ENST00000444889 1784 ntBASIC3.52□□□□□ -1.85
RETP07949 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RETP07949 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
RETP07949 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.51□□□□□ -1.85
RETP07949 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
RETP07949 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RETP07949 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
RETP07949 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RETP07949 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
RETP07949 BX323014.1-201ENST00000412876 237 ntBASIC3.51□□□□□ -1.85
RETP07949 RPL31P2-201ENST00000413849 377 ntBASIC3.51□□□□□ -1.85
RETP07949 XKRYP4-201ENST00000414395 483 ntBASIC3.51□□□□□ -1.85
RETP07949 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.51□□□□□ -1.85
RETP07949 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.51□□□□□ -1.85
RETP07949 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.51□□□□□ -1.85
RETP07949 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
RETP07949 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.51□□□□□ -1.85
RETP07949 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.51□□□□□ -1.85
RETP07949 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RETP07949 XKRYP5-201ENST00000449659 483 ntBASIC3.51□□□□□ -1.85
RETP07949 U3.44-201ENST00000458938 192 ntBASIC3.51□□□□□ -1.85
RETP07949 AC004801.2-202ENST00000463559 283 ntBASIC3.51□□□□□ -1.85
RETP07949 RPL21P8-201ENST00000465083 535 ntBASIC3.51□□□□□ -1.85
RETP07949 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.51□□□□□ -1.85
RETP07949 AC025181.1-201ENST00000477507 416 ntBASIC3.51□□□□□ -1.85
RETP07949 RPS3AP50-201ENST00000487064 803 ntBASIC3.51□□□□□ -1.85
RETP07949 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.51□□□□□ -1.85
RETP07949 AC108157.1-201ENST00000510511 539 ntBASIC3.51□□□□□ -1.85
RETP07949 RNA5SP341-201ENST00000516261 117 ntBASIC3.51□□□□□ -1.85
RETP07949 RN7SKP60-201ENST00000516985 239 ntBASIC3.51□□□□□ -1.85
RETP07949 AC027309.2-201ENST00000520566 192 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms